RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 C1orf220Q5T0J3 134 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 PKN3Q6P5Z2 889 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 MAMSTRQ6ZN01 415 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 NUP93Q8N1F7 819 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 GUF1Q8N442 669 aaKnown RBP18.78■□□□□ 0.6
NME3-205ENST00000563854 TMEM174Q8WUU8 243 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 SECISBP2LQ93073 1101 aaKnown RBP18.78■□□□□ 0.6
NME3-205ENST00000563854 SMARCD1Q96GM5 515 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 KCNK16Q96T55 309 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 IMPG2Q9BZV3 1241 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 FAM49BQ9NUQ9 324 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 CPQQ9Y646 472 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 GVINP1Q7Z2Y8 2422 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 FRYLO94915 3013 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 LEFTY2O00292 366 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 RPL13P26373 211 aaKnown RBP18.77■□□□□ 0.6
NME3-205ENST00000563854 YWHAQP27348 245 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 HOXC13P31276 330 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 ID4P47928 161 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 SRSF5Q13243 272 aaKnown RBP18.77■□□□□ 0.6
NME3-205ENST00000563854 ADAM9Q13443 819 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 EML3Q32P44 896 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 INTS8Q75QN2 995 aaKnown RBP18.77■□□□□ 0.6
NME3-205ENST00000563854 SYNPOQ8N3V7 929 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 TAF4BQ92750 862 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 EEF2KMTQ96G04 330 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 P2RY13Q9BPV8 354 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 LINC00597Q9H2U6 94 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 FBRSL1Q9HCM7 1045 aaKnown RBP18.77■□□□□ 0.6
NME3-205ENST00000563854 DMAP1Q9NPF5 467 aaPredicted RBP18.77■□□□□ 0.6
NME3-205ENST00000563854 WDR87Q6ZQQ6 2873 aa18.77■□□□□ 0.6
NME3-205ENST00000563854 K7ESF4 209 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 TRDMT1O14717 391 aaKnown RBP18.76■□□□□ 0.59
NME3-205ENST00000563854 IKBKBO14920 756 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 RNF40O75150 1001 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 RTN3O95197 1032 aaPredicted RBP18.76■□□□□ 0.59
NME3-205ENST00000563854 ASS1P00966 412 aaKnown RBP18.76■□□□□ 0.59
NME3-205ENST00000563854 MBL2P11226 248 aaPredicted RBP18.76■□□□□ 0.59
NME3-205ENST00000563854 ADORA2BP29275 332 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 PSMC2P35998 433 aaKnown RBP18.76■□□□□ 0.59
NME3-205ENST00000563854 ASPAP45381 313 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 PPP3CCP48454 512 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 GALK1P51570 392 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 SLC5A3P53794 718 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 ZXDBP98169 803 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 PPP3CAQ08209 521 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 FUKQ8N0W3 1084 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 SCAMP5Q8TAC9 235 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 SLC2A14Q8TDB8 520 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 TAS1R2Q8TE23 839 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 EXOC4Q96A65 974 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 JAKMIP2Q96AA8 810 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 RNF38Q9H0F5 515 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 GMEB2Q9UKD1 530 aa18.76■□□□□ 0.59
NME3-205ENST00000563854 MAPK13O15264 365 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 NFATC1O95644 943 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 PFKLP17858 780 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 CD58P19256 250 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 TRIM21P19474 475 aaKnown RBP18.75■□□□□ 0.59
NME3-205ENST00000563854 PXNP49023 591 aaPredicted RBP18.75■□□□□ 0.59
NME3-205ENST00000563854 NR1H3Q13133 447 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 NFIL3Q16649 462 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 PAQR9Q6ZVX9 377 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 FILIP1Q7Z7B0 1213 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 LONP2Q86WA8 852 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 CCDC150Q8NCX0 1101 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 PDZD8Q8NEN9 1154 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 CD101Q93033 1021 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 CFAP97Q9P2B7 532 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 USP18Q9UMW8 372 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 SLC8A2Q9UPR5 921 aa18.75■□□□□ 0.59
NME3-205ENST00000563854 EP300Q09472 2414 aaPredicted RBP18.75■□□□□ 0.59
NME3-205ENST00000563854 SPTBN4Q9H254 2564 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 PAPSS2O95340 614 aaPredicted RBP18.74■□□□□ 0.59
NME3-205ENST00000563854 OAS1P00973 400 aaKnown RBP18.74■□□□□ 0.59
NME3-205ENST00000563854 TCF3P15923 654 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 DRD1P21728 446 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 MAP3K7CLP57077 242 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 NUCB2P80303 420 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 SLC7A9P82251 487 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 SIM2Q14190 667 aaPredicted RBP18.74■□□□□ 0.59
NME3-205ENST00000563854 ZCWPW2Q504Y3 356 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 CEP68Q76N32 757 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 FMR1NBQ8N0W7 255 aaPredicted RBP18.74■□□□□ 0.59
NME3-205ENST00000563854 C12orf29Q8N999 325 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 ERCC4Q92889 916 aaPredicted RBP18.74■□□□□ 0.59
NME3-205ENST00000563854 APOBEC3GQ9HC16 384 aaKnown RBP18.74■□□□□ 0.59
NME3-205ENST00000563854 POLR3BQ9NW08 1133 aaPredicted RBP18.74■□□□□ 0.59
NME3-205ENST00000563854 RMND1Q9NWS8 449 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 GMIPQ9P107 970 aa18.74■□□□□ 0.59
NME3-205ENST00000563854 CHORDC1Q9UHD1 332 aaPredicted RBP18.74■□□□□ 0.59
NME3-205ENST00000563854 COCHO43405 550 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 HRO43593 1189 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 ATG13O75143 517 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 EPB41P11171 864 aaKnown RBP18.73■□□□□ 0.59
NME3-205ENST00000563854 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.73■□□□□ 0.59
NME3-205ENST00000563854 UNC93AQ86WB7 457 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 RPLP0P6Q8NHW5 317 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 RMDN1Q96DB5 314 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 TWNKQ96RR1 684 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms