RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CAMK2GQ13555 558 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 HSP90AA2PQ14568 343 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 PAN2Q504Q3 1202 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 HSP90AA4PQ58FG1 418 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 ZC3H12AQ5D1E8 599 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 TCP11X2Q5H9J9 407 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 GLB1LQ6UWU2 654 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 INTS8Q75QN2 995 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 FRMD5Q7Z6J6 570 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 ZNF280BQ86YH2 543 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 CD302Q8IX05 232 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 CMTR2Q8IYT2 770 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 RBBP8NLQ8NC74 664 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 UTP4Q969X6 686 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 SLC35C1Q96A29 364 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 C18orf25Q96B23 403 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 MYRFLQ96LU7 910 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 CGRRF1Q99675 332 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 NAT10Q9H0A0 1025 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 MTIF3Q9H2K0 278 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 GSX1Q9H4S2 264 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 CWH43Q9H720 699 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 NRDE2Q9H7Z3 1164 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 GOLGA2P5Q9HBQ8 144 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 UBN1Q9NPG3 1134 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 TBC1D13Q9NVG8 400 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 INTS13Q9NVM9 706 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 TAB2Q9NYJ8 693 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 CACNG4Q9UBN1 327 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 TUBGCP4Q9UGJ1 667 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 ARMCX3Q9UH62 379 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 LIMA1Q9UHB6 759 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 SIX4Q9UIU6 781 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 FRMD4BQ9Y2L6 1034 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 ATP8A1Q9Y2Q0 1164 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 DERAQ9Y315 318 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 PCDHB7Q9Y5E2 793 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 PCDHB5Q9Y5E4 795 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 TTC3P53804 2025 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 MICAL3Q7RTP6 2002 aa5.6□□□□□ -1.51
HERPUD1-207ENST00000563781 A0A0C4DFX4 3053 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 ANO9A1A5B4 782 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 CASTOR2A6NHX0 329 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 SMTNL1A8MU46 457 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 KCNJ18B7U540 433 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 ALG1L2C9J202 215 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 F8W810 466 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TMPRSS2O15393 492 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 AP5Z1O43299 807 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 CREB3O43889 395 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 DDHD2O94830 711 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 VNN1O95497 513 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 GNA14O95837 355 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 POMCP01189 267 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 PF4P02776 101 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 C4BPAP04003 597 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 THP07101 528 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 IMPDH2P12268 514 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 KRT13P13646 458 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 MYOGP15173 224 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TFE3P19532 575 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 IGFBP6P24592 240 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 EEF1GP26641 437 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 LRPAP1P30533 357 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 GTF2H1P32780 548 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 SLC11A1P49279 550 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 RABGGTBP53611 331 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 EPHB1P54762 984 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TFAMQ00059 246 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 ID3Q02535 119 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TUSC3Q13454 348 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 KCNJ12Q14500 433 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 HLTFQ14527 1009 aaKnown RBP eCLIP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TMEM132DQ14C87 1099 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 KRT31Q15323 416 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 SURF1Q15526 300 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 FXNQ16595 210 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TPD52L1Q16890 204 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 RSPO4Q2I0M5 234 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 ZACNQ401N2 412 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 CCDC40Q4G0X9 1142 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 CBWD6Q4V339 395 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TM4SF20Q53R12 229 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 DCAF17Q5H9S7 520 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 CBWD3Q5JTY5 395 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 HABP4Q5JVS0 413 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 MIIPQ5JXC2 388 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 CBWD5Q5RIA9 395 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 SNAP47Q5SQN1 464 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TDRD10Q5VZ19 366 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 CD300LGQ6UXG3 332 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 C15orf39Q6ZRI6 1047 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 PRR23CQ6ZRP0 262 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TRAPPC11Q7Z392 1133 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 SPRED2Q7Z698 418 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 WDR49Q8IV35 697 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 FAM114A1Q8IWE2 563 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 FAM20CQ8IXL6 584 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 COLGALT2Q8IYK4 626 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms