RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 ZC3H10Q96K80 434 aaKnown RBP22.32■■□□□ 1.16
CHD9-208ENST00000563410 B3GNT5Q9BYG0 378 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 FAM13BQ9NYF5 915 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 EHD2Q9NZN4 543 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 NXF1Q9UBU9 619 aaKnown RBP22.32■■□□□ 1.16
CHD9-208ENST00000563410 LAMA1P25391 3075 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 THADAQ6YHU6 1953 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 ANTXRLA6NF34 631 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 KLRC4O43908 158 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 FOXD2O60548 495 aaPredicted RBP22.31■■□□□ 1.16
CHD9-208ENST00000563410 ME1P48163 572 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 TAF10Q12962 218 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 PSMD2Q13200 908 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 PKP1Q13835 747 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 SF3A2Q15428 464 aaKnown RBP22.31■■□□□ 1.16
CHD9-208ENST00000563410 TDRD10Q5VZ19 366 aaKnown RBP22.31■■□□□ 1.16
CHD9-208ENST00000563410 SYAP1Q96A49 352 aaPredicted RBP22.31■■□□□ 1.16
CHD9-208ENST00000563410 ACDQ96AP0 544 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 ELOVL4Q9GZR5 314 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 VRTNQ9H8Y1 702 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 CPQQ9Y646 472 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 CHD8Q9HCK8 2581 aa22.31■■□□□ 1.16
CHD9-208ENST00000563410 LRRIQ3A6PVS8 624 aaPredicted RBP22.3■■□□□ 1.16
CHD9-208ENST00000563410 K7EQS6 105 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 EXOC3O60645 756 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 CYP17A1P05093 508 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 ZNF806P0C7X5 589 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 PDIA4P13667 645 aaKnown RBP22.3■■□□□ 1.16
CHD9-208ENST00000563410 PLK5Q496M5 336 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 PLA2G2CQ5R387 149 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 FILIP1Q7Z7B0 1213 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 ADGRG2Q8IZP9 1017 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 KIAA1958Q8N8K9 716 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 PARD3BQ8TEW8 1205 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 DUSP15Q9H1R2 295 aaPredicted RBP22.3■■□□□ 1.16
CHD9-208ENST00000563410 SMYD3Q9H7B4 428 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 RXFP3Q9NSD7 469 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 EBF1Q9UH73 591 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 SERTAD1Q9UHV2 236 aa22.3■■□□□ 1.16
CHD9-208ENST00000563410 ABL1P00519 1130 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 ADRB1P08588 477 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 CDH8P55286 799 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 CLDN10P78369 228 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 STK4Q13043 487 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 PPM1JQ5JR12 505 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 ATL3Q6DD88 541 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 PAQR9Q6ZVX9 377 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 KIAA0895Q8NCT3 520 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 USP33Q8TEY7 942 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 ELMO3Q96BJ8 720 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 CNTNAP3BQ96NU0 1288 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 CNTNAP3Q9BZ76 1288 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 DMAC2Q9NW81 257 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 SMPD4Q9NXE4 827 aa22.29■■□□□ 1.16
CHD9-208ENST00000563410 MAP1BP46821 2468 aaKnown RBP22.28■■□□□ 1.16
CHD9-208ENST00000563410 DCLK1O15075 740 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 ACTN4O43707 911 aaKnown RBP22.28■■□□□ 1.16
CHD9-208ENST00000563410 PHACTR2O75167 634 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 VNN1O95497 513 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 APBB3O95704 486 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 C4BPAP04003 597 aaKnown RBP22.28■■□□□ 1.16
CHD9-208ENST00000563410 DNM1Q05193 864 aaKnown RBP22.28■■□□□ 1.16
CHD9-208ENST00000563410 IFRD2Q12894 506 aaPredicted RBP22.28■■□□□ 1.16
CHD9-208ENST00000563410 AASDHQ4L235 1098 aaPredicted RBP22.28■■□□□ 1.16
CHD9-208ENST00000563410 NUP93Q8N1F7 819 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 SLITRK1Q96PX8 696 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 KCNK16Q96T55 309 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 SDCBP2Q9H190 292 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 SMOC1Q9H4F8 434 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 RCOR1Q9UKL0 485 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 PCDHGA5Q9Y5G8 931 aa22.28■■□□□ 1.16
CHD9-208ENST00000563410 SCAMP3O14828 347 aaKnown RBP22.27■■□□□ 1.16
CHD9-208ENST00000563410 SLFN14P0C7P3 912 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 YWHAQP27348 245 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 LIMK1P53667 647 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 SEC13P55735 322 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 MESP2Q0VG99 397 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 BIRC3Q13489 604 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 DHCR24Q15392 516 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 ZNF699Q32M78 642 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 FAM35AQ86V20 835 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 HSCBQ8IWL3 235 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 CEP57L1Q8IYX8 460 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 GOLGA5Q8TBA6 731 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 TMEM174Q8WUU8 243 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 KCTD10Q9H3F6 313 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 CFAP97Q9P2B7 532 aa22.27■■□□□ 1.16
CHD9-208ENST00000563410 KMT2BQ9UMN6 2715 aaPredicted RBP22.27■■□□□ 1.16
CHD9-208ENST00000563410 TNFRSF10BO14763 440 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 RTN3O95197 1032 aaPredicted RBP22.26■■□□□ 1.15
CHD9-208ENST00000563410 MBL2P11226 248 aaPredicted RBP22.26■■□□□ 1.15
CHD9-208ENST00000563410 MPLP40238 635 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 AP3M2P53677 418 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 DLG4P78352 724 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 NCOA4Q13772 614 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 KMT5BQ4FZB7 885 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 C2orf27AQ580R0 203 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 ZNF667Q5HYK9 610 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 RHBDF2Q6PJF5 856 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 SCARA5Q6ZMJ2 495 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms