RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 ARHGAP26Q9UNA1 814 aa17.89■□□□□ 0.45
CLK3-210ENST00000563112 KIF26AQ9ULI4 1882 aaPredicted RBP17.88■□□□□ 0.45
CLK3-210ENST00000563112 AP1G2O75843 785 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 TCF3P15923 654 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 PRCPP42785 496 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 ASPAP45381 313 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 PPP3CAQ08209 521 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 GRSF1Q12849 480 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLK3-210ENST00000563112 USP4Q13107 963 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 KRT39Q6A163 491 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 OVCA2Q8WZ82 227 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 ATP2A3Q93084 1043 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 FBXO32Q969P5 355 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 KCNK16Q96T55 309 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 COMMD8Q9NX08 183 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 MYO15AQ9UKN7 3530 aa17.88■□□□□ 0.45
CLK3-210ENST00000563112 SPTBN4Q9H254 2564 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 ARSAP15289 507 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 STIM1Q13586 685 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 COBLL1Q53SF7 1204 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 FUKQ8N0W3 1084 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 ZBTB44Q8NCP5 570 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 RIN3Q8TB24 985 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 TAS1R2Q8TE23 839 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 NELL1Q92832 810 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 HINFPQ9BQA5 517 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 NIF3L1Q9GZT8 377 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 ECT2Q9H8V3 914 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.87■□□□□ 0.45
CLK3-210ENST00000563112 KRT82Q9NSB4 513 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 TMEM30AQ9NV96 361 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 PCDHA5Q9Y5H7 936 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 WNT6Q9Y6F9 365 aa17.87■□□□□ 0.45
CLK3-210ENST00000563112 DMDP11532 3685 aa17.86■□□□□ 0.45
CLK3-210ENST00000563112 LEFTY2O00292 366 aa17.86■□□□□ 0.45
CLK3-210ENST00000563112 TRDMT1O14717 391 aaKnown RBP17.86■□□□□ 0.45
CLK3-210ENST00000563112 MXI1P50539 228 aa17.86■□□□□ 0.45
CLK3-210ENST00000563112 SLC7A9P82251 487 aa17.86■□□□□ 0.45
CLK3-210ENST00000563112 FKBP3Q00688 224 aaKnown RBP17.86■□□□□ 0.45
CLK3-210ENST00000563112 ORC1Q13415 861 aa17.86■□□□□ 0.45
CLK3-210ENST00000563112 CCINQ13939 588 aa17.86■□□□□ 0.45
CLK3-210ENST00000563112 PAQR9Q6ZVX9 377 aa17.86■□□□□ 0.45
CLK3-210ENST00000563112 SLC2A14Q8TDB8 520 aa17.86■□□□□ 0.45
CLK3-210ENST00000563112 NT5C1AQ9BXI3 368 aa17.86■□□□□ 0.45
CLK3-210ENST00000563112 OTOL1A6NHN0 477 aaPredicted RBP17.85■□□□□ 0.45
CLK3-210ENST00000563112 SLC16A3O15427 465 aaKnown RBP17.85■□□□□ 0.45
CLK3-210ENST00000563112 LILRB5O75023 590 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 NFATC1O95644 943 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 MBL2P11226 248 aaPredicted RBP17.85■□□□□ 0.45
CLK3-210ENST00000563112 CCDC130P13994 396 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 DRD1P21728 446 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 GJA4P35212 333 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 MYH10P35580 1976 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 SLC5A3P53794 718 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 MCCD1P59942 119 aaPredicted RBP17.85■□□□□ 0.45
CLK3-210ENST00000563112 SATB1Q01826 763 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 LRRC63Q05C16 580 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 INCA1Q0VD86 236 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 GAS6Q14393 721 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 EML3Q32P44 896 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 TMEM196Q5HYL7 178 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 WDR44Q5JSH3 913 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 Q6ZS52 159 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 DDX42Q86XP3 938 aaKnown RBP eCLIP17.85■□□□□ 0.45
CLK3-210ENST00000563112 ELOA2Q8IYF1 753 aaPredicted RBP17.85■□□□□ 0.45
CLK3-210ENST00000563112 TTC39CQ8N584 583 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 KIAA1958Q8N8K9 716 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 FBXL13Q8NEE6 735 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 SPATA20Q8TB22 786 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 RUBCNQ92622 972 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 EEF2KMTQ96G04 330 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 FAXDC2Q96IV6 333 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 P2RY13Q9BPV8 354 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 RNF38Q9H0F5 515 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 APOBEC3GQ9HC16 384 aaKnown RBP17.85■□□□□ 0.45
CLK3-210ENST00000563112 FAM49BQ9NUQ9 324 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 HMGXB4Q9UGU5 601 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 CHORDC1Q9UHD1 332 aaPredicted RBP17.85■□□□□ 0.45
CLK3-210ENST00000563112 CPQQ9Y646 472 aa17.85■□□□□ 0.45
CLK3-210ENST00000563112 SLC9A3R1O14745 358 aaPredicted RBP17.84■□□□□ 0.45
CLK3-210ENST00000563112 TNFRSF10BO14763 440 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 PSMA7O14818 248 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 ATG13O75143 517 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 PAPSS2O95340 614 aaPredicted RBP17.84■□□□□ 0.45
CLK3-210ENST00000563112 OLFM2O95897 454 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 OAS1P00973 400 aaKnown RBP17.84■□□□□ 0.45
CLK3-210ENST00000563112 FAM200BP0CF97 657 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 CD58P19256 250 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 ADORA2BP29275 332 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 PPP1R2P41236 205 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 GALK1P51570 392 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 MAP3K7CLP57077 242 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 TCERG1LQ5VWI1 586 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 ANKRD40Q6AI12 368 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 FSTL4Q6MZW2 842 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 C12orf29Q8N999 325 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 SUMF1Q8NBK3 374 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 SCAMP5Q8TAC9 235 aa17.84■□□□□ 0.45
CLK3-210ENST00000563112 ERCC4Q92889 916 aaPredicted RBP17.84■□□□□ 0.45
CLK3-210ENST00000563112 SECISBP2LQ93073 1101 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms