RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 TAF10Q12962 218 aa13.93□□□□□ -0.18
AC009055.1-201ENST00000562656 PRR23BQ6ZRT6 265 aa13.93□□□□□ -0.18
AC009055.1-201ENST00000562656 DDX42Q86XP3 938 aaKnown RBP eCLIP13.93□□□□□ -0.18
AC009055.1-201ENST00000562656 CD101Q93033 1021 aa13.93□□□□□ -0.18
AC009055.1-201ENST00000562656 ZNF518BQ9C0D4 1074 aa13.93□□□□□ -0.18
AC009055.1-201ENST00000562656 C2orf42Q9NWW7 574 aa13.93□□□□□ -0.18
AC009055.1-201ENST00000562656 SLC8A2Q9UPR5 921 aa13.93□□□□□ -0.18
AC009055.1-201ENST00000562656 WNT6Q9Y6F9 365 aa13.93□□□□□ -0.18
AC009055.1-201ENST00000562656 DCHS1Q96JQ0 3298 aa13.93□□□□□ -0.18
AC009055.1-201ENST00000562656 LEFTY2O00292 366 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 FOXD2O60548 495 aaPredicted RBP13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 RNF40O75150 1001 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 EGFP01133 1207 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 YWHAQP27348 245 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 NDUFA8P51970 172 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 CACNA2D1P54289 1103 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 CDH8P55286 799 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 DLG4P78352 724 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 ZXDBP98169 803 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 DPYDQ12882 1025 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 SNX30Q5VWJ9 437 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 INTS8Q75QN2 995 aaKnown RBP13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 SV2AQ7L0J3 742 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 DGLUCYQ7Z3D6 616 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 UNC93AQ86WB7 457 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 CRYBG2Q8N1P7 616 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 GUF1Q8N442 669 aaKnown RBP13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 SMARCD1Q96GM5 515 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 SMYD3Q9H7B4 428 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 DMAP1Q9NPF5 467 aaPredicted RBP13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 TMEM30AQ9NV96 361 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 IL37Q9NZH6 218 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 CACNA1AO00555 2505 aa13.92□□□□□ -0.18
AC009055.1-201ENST00000562656 FAM92AA1XBS5 289 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 CLDN5O00501 218 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 AKAP3O75969 853 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 ASS1P00966 412 aaKnown RBP13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 TRIM21P19474 475 aaKnown RBP13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 RPL13P26373 211 aaKnown RBP13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 MCCD1P59942 119 aaPredicted RBP13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 RSPO4Q2I0M5 234 aaPredicted RBP13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 CEP135Q66GS9 1140 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 HEATR6Q6AI08 1181 aaKnown RBP13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 PKN3Q6P5Z2 889 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 KRBA2Q6ZNG9 492 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 PAQR9Q6ZVX9 377 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 SYT13Q7L8C5 426 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 FAM35AQ86V20 835 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 ADGRG2Q8IZP9 1017 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 TTC16Q8NEE8 873 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 GAB3Q8WWW8 586 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 ACDQ96AP0 544 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 CCDC34Q96HJ3 373 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 LOXL4Q96JB6 756 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 RNF38Q9H0F5 515 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 SDCBP2Q9H190 292 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 LINC00597Q9H2U6 94 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 USP18Q9UMW8 372 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 CPQQ9Y646 472 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 CEP250Q9BV73 2442 aa13.91□□□□□ -0.18
AC009055.1-201ENST00000562656 TNFRSF10BO14763 440 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 CLSTN1O94985 981 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 ABL1P00519 1130 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 NR2F2P24468 414 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 EIF2DP41214 584 aaKnown RBP13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 RAP1GAPP47736 663 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 TUBP50607 506 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 VAMP7P51809 220 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 SPEM2Q0P670 501 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 CSRP2Q16527 193 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 LPAL2Q16609 132 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 C1orf220Q5T0J3 134 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 CEP68Q76N32 757 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 FUKQ8N0W3 1084 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 FBXO32Q969P5 355 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 OTUB2Q96DC9 234 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 KCNK16Q96T55 309 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 DUSP9Q99956 384 aaKnown RBP13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 MED10Q9BTT4 135 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 IMPG2Q9BZV3 1241 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 CSNK1G1Q9HCP0 422 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 PARD6AQ9NPB6 346 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 TBC1D14Q9P2M4 693 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 WDR87Q6ZQQ6 2873 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 KIAA1549LQ6ZVL6 1849 aa13.9□□□□□ -0.18
AC009055.1-201ENST00000562656 E2F8A0AVK6 867 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 RPP40O75818 363 aaKnown RBP13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 AP1G2O75843 785 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 ZNF202O95125 648 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 ZDHHC11BP0C7U3 371 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 PSMC2P35998 433 aaKnown RBP13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 PIK3CAP42336 1068 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 ASPAP45381 313 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 NDST1P52848 882 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 SLC5A3P53794 718 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 INCA1Q0VD86 236 aa13.89□□□□□ -0.19
AC009055.1-201ENST00000562656 SRSF5Q13243 272 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms