RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 HOXD9P28356 352 aaPredicted RBP3.91□□□□□ -1.78
DENND4A-205ENST00000562540 NANOS2P60321 138 aaKnown RBP3.91□□□□□ -1.78
DENND4A-205ENST00000562540 U2AF1Q01081 240 aaKnown RBP eCLIP3.91□□□□□ -1.78
DENND4A-205ENST00000562540 NFE2Q16621 373 aaPredicted RBP3.91□□□□□ -1.78
DENND4A-205ENST00000562540 DLK2Q6UY11 383 aa3.91□□□□□ -1.78
DENND4A-205ENST00000562540 C9orf47Q6ZRZ4 202 aa3.91□□□□□ -1.78
DENND4A-205ENST00000562540 USP45Q70EL2 814 aa3.91□□□□□ -1.78
DENND4A-205ENST00000562540 PPP1R3BQ86XI6 285 aa3.91□□□□□ -1.78
DENND4A-205ENST00000562540 CHPFQ8IZ52 775 aa3.91□□□□□ -1.78
DENND4A-205ENST00000562540 SOCS4Q8WXH5 440 aa3.91□□□□□ -1.78
DENND4A-205ENST00000562540 LRGUKQ96M69 825 aa3.91□□□□□ -1.78
DENND4A-205ENST00000562540 FYTTD1Q96QD9 318 aaKnown RBP3.91□□□□□ -1.78
DENND4A-205ENST00000562540 MAP3K14Q99558 947 aa3.91□□□□□ -1.78
DENND4A-205ENST00000562540 DPCDQ9BVM2 203 aaPredicted RBP3.91□□□□□ -1.78
DENND4A-205ENST00000562540 GTPBP4Q9BZE4 634 aaKnown RBP3.91□□□□□ -1.78
DENND4A-205ENST00000562540 PI4KBQ9UBF8 816 aa3.91□□□□□ -1.78
DENND4A-205ENST00000562540 NDRG4Q9ULP0 352 aaKnown RBP3.91□□□□□ -1.78
DENND4A-205ENST00000562540 TCRBV5S1A1TA0A578 114 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 SLC16A6O15403 523 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 TSPAN6O43657 245 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 RNF8O76064 485 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 UNC5CO95185 931 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 POU2F2P09086 479 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 HMGB1P09429 215 aaKnown RBP3.9□□□□□ -1.79
DENND4A-205ENST00000562540 HSPA6P17066 643 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 PDCP20941 246 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 PDE6CP51160 858 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 HK3P52790 923 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 ZNF91Q05481 1191 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 EXOSC9Q06265 439 aaKnown RBP3.9□□□□□ -1.79
DENND4A-205ENST00000562540 ERV3-1Q14264 604 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 PGS1Q32NB8 556 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 LEXMQ3ZCV2 418 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 DEPDC1Q5TB30 811 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 CXorf57Q6NSI4 855 aaKnown RBP3.9□□□□□ -1.79
DENND4A-205ENST00000562540 TPH2Q8IWU9 490 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 SLC15A3Q8IY34 581 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 GRAMD1CQ8IYS0 662 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 OSR1Q8TAX0 266 aaPredicted RBP3.9□□□□□ -1.79
DENND4A-205ENST00000562540 AIFM3Q96NN9 605 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 MOGAT1Q96PD6 335 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 MMS19Q96T76 1030 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 LMBRD1Q9NUN5 540 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 POT1Q9NUX5 634 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 NOB1Q9ULX3 412 aaKnown RBP3.9□□□□□ -1.79
DENND4A-205ENST00000562540 SHOC2Q9UQ13 582 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 PCDHA1Q9Y5I3 950 aa3.9□□□□□ -1.79
DENND4A-205ENST00000562540 CRYABP02511 175 aaKnown RBP3.89□□□□□ -1.79
DENND4A-205ENST00000562540 FTLP02792 175 aaPredicted RBP3.89□□□□□ -1.79
DENND4A-205ENST00000562540 CYP19A1P11511 503 aaPredicted RBP3.89□□□□□ -1.79
DENND4A-205ENST00000562540 E2F1Q01094 437 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 SATB1Q01826 763 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 ZNF267Q14586 743 aaPredicted RBP3.89□□□□□ -1.79
DENND4A-205ENST00000562540 AMOTQ4VCS5 1084 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 CCDC157Q569K6 752 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 RNASE12Q5GAN4 147 aaKnown RBP3.89□□□□□ -1.79
DENND4A-205ENST00000562540 FAM102BQ5T8I3 360 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 ADAMTS18Q8TE60 1221 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 OSCP1Q8WVF1 389 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 MVB12AQ96EY5 273 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 HIPK2Q9H2X6 1198 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 PROCRQ9UNN8 238 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 ZMYM2Q9UBW7 1377 aa3.89□□□□□ -1.79
DENND4A-205ENST00000562540 BTBD19C9JJ37 291 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 hCG_1984214I3L0E3 225 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 AP4M1O00189 453 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 AP1G1O43747 822 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 GRPP07492 148 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 PSG1P11464 419 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 TYRP14679 529 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 MLC1Q15049 377 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 CYP1B1Q16678 543 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 NXNQ6DKJ4 435 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 DPY19L3Q6ZPD9 716 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 BCDIN3DQ7Z5W3 292 aaKnown RBP3.88□□□□□ -1.79
DENND4A-205ENST00000562540 PIP4P1Q86T03 277 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 WDR75Q8IWA0 830 aaKnown RBP3.88□□□□□ -1.79
DENND4A-205ENST00000562540 TCEAL8Q8IYN2 117 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 BRIX1Q8TDN6 353 aaKnown RBP3.88□□□□□ -1.79
DENND4A-205ENST00000562540 HPS3Q969F9 1004 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 THOC3Q96J01 351 aaKnown RBP3.88□□□□□ -1.79
DENND4A-205ENST00000562540 FAM167AQ96KS9 214 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 SIGLEC11Q96RL6 698 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 SLC12A5Q9H2X9 1139 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 ASIC5Q9NY37 505 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 MRPS17Q9Y2R5 130 aaKnown RBP3.88□□□□□ -1.79
DENND4A-205ENST00000562540 PLEKHM1Q9Y4G2 1056 aa3.88□□□□□ -1.79
DENND4A-205ENST00000562540 SMAD6O43541 496 aaKnown RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 TOMM40O96008 361 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 CSF1RP07333 972 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 MYCLP12524 364 aaPredicted RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 KRT10P13645 584 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 ADORA2AP29274 412 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 LRPAP1P30533 357 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 VIPR2P41587 438 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 ID2Q02363 134 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 SRSF1Q07955 248 aaKnown RBP eCLIP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 NPY5RQ15761 445 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 KRTAP27-1Q3LI81 207 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 MINDY4Q4G0A6 757 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms