RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 FAXDC2Q96IV6 333 aa18.9■□□□□ 0.62
CMTM3-204ENST00000562357 SLC22A12Q96S37 553 aa18.9■□□□□ 0.62
CMTM3-204ENST00000562357 KCNK16Q96T55 309 aa18.9■□□□□ 0.62
CMTM3-204ENST00000562357 METTL14Q9HCE5 456 aaKnown RBP18.9■□□□□ 0.62
CMTM3-204ENST00000562357 FAM49BQ9NUQ9 324 aa18.9■□□□□ 0.62
CMTM3-204ENST00000562357 COMMD8Q9NX08 183 aa18.9■□□□□ 0.62
CMTM3-204ENST00000562357 RAB20Q9NX57 234 aa18.9■□□□□ 0.62
CMTM3-204ENST00000562357 CHMP5Q9NZZ3 219 aa18.9■□□□□ 0.62
CMTM3-204ENST00000562357 MAN1B1Q9UKM7 699 aa18.9■□□□□ 0.62
CMTM3-204ENST00000562357 R4GN57 208 aa18.9■□□□□ 0.62
CMTM3-204ENST00000562357 COL4A2P08572 1712 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 CHRNB1P11230 501 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 ANP32AP39687 249 aaKnown RBP18.89■□□□□ 0.61
CMTM3-204ENST00000562357 SLC5A3P53794 718 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 GRSF1Q12849 480 aaKnown RBP eCLIP18.89■□□□□ 0.61
CMTM3-204ENST00000562357 NR1H3Q13133 447 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 FZD5Q13467 585 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 PON2Q15165 354 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 TRIM68Q6AZZ1 485 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 ISM2Q6H9L7 571 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 DDX42Q86XP3 938 aaKnown RBP eCLIP18.89■□□□□ 0.61
CMTM3-204ENST00000562357 ZNF687Q8N1G0 1237 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 NACA2Q9H009 215 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 FBXO44Q9H4M3 255 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 APOBEC3GQ9HC16 384 aaKnown RBP18.89■□□□□ 0.61
CMTM3-204ENST00000562357 HMGXB4Q9UGU5 601 aa18.89■□□□□ 0.61
CMTM3-204ENST00000562357 BICDL2A1A5D9 508 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 TRIM49BA6NDI0 452 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 LMNAP02545 664 aaKnown RBP18.88■□□□□ 0.61
CMTM3-204ENST00000562357 ARSAP15289 507 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 TCF3P15923 654 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 ADORA2BP29275 332 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 SLC7A9P82251 487 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 CCDC40Q4G0X9 1142 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 KLHL10Q6JEL2 608 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 TXNDC11Q6PKC3 985 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 ASCL5Q7RTU5 278 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 ZC3H3Q8IXZ2 948 aaKnown RBP18.88■□□□□ 0.61
CMTM3-204ENST00000562357 MAML2Q8IZL2 1156 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-204ENST00000562357 SYNPOQ8N3V7 929 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 C12orf29Q8N999 325 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 CYFIP2Q96F07 1278 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 CEP63Q96MT8 703 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 FAM126AQ9BYI3 521 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-204ENST00000562357 FAM124BQ9H5Z6 455 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-204ENST00000562357 HPS4Q9NQG7 708 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 PRMT8Q9NR22 394 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-204ENST00000562357 TMEM30AQ9NV96 361 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 PCDHGA2Q9Y5H1 932 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 WNT6Q9Y6F9 365 aa18.88■□□□□ 0.61
CMTM3-204ENST00000562357 SLC9A3R1O14745 358 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-204ENST00000562357 GADD45BO75293 160 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-204ENST00000562357 CILPO75339 1184 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 NFATC1O95644 943 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 MBL2P11226 248 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-204ENST00000562357 CXCL12P48061 93 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 PMS1P54277 932 aaKnown RBP18.87■□□□□ 0.61
CMTM3-204ENST00000562357 NRLP54845 237 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 MAP3K7CLP57077 242 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 MCCD1P59942 119 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-204ENST00000562357 UBE2HP62256 183 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 HECTD3Q5T447 861 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 MAMSTRQ6ZN01 415 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 PAQR9Q6ZVX9 377 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 SPEM1Q8N4L4 309 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 HNRNPABQ99729 332 aaKnown RBP18.87■□□□□ 0.61
CMTM3-204ENST00000562357 ECT2Q9H8V3 914 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 RBM12Q9NTZ6 932 aaKnown RBP18.87■□□□□ 0.61
CMTM3-204ENST00000562357 ZSCAN32Q9NX65 697 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 CPQQ9Y646 472 aa18.87■□□□□ 0.61
CMTM3-204ENST00000562357 ZFHX2Q9C0A1 2572 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-204ENST00000562357 PTPRDP23468 1912 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 OBSL1O75147 1896 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 LEFTY2O00292 366 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 OAS1P00973 400 aaKnown RBP18.86■□□□□ 0.61
CMTM3-204ENST00000562357 YWHAEP62258 255 aaKnown RBP18.86■□□□□ 0.61
CMTM3-204ENST00000562357 CETN1Q12798 172 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 KIAA1958Q8N8K9 716 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 SCAMP5Q8TAC9 235 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 RIN3Q8TB24 985 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 NELFBQ8WX92 580 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 SEMA4DQ92854 862 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 JAKMIP2Q96AA8 810 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 HEXIM2Q96MH2 286 aaKnown RBP18.86■□□□□ 0.61
CMTM3-204ENST00000562357 TWNKQ96RR1 684 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 SMOQ99835 787 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 CSNK1G1Q9HCP0 422 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 TLR8Q9NR97 1041 aaKnown RBP18.86■□□□□ 0.61
CMTM3-204ENST00000562357 SMPD4Q9NXE4 827 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 ZNF638Q14966 1978 aaKnown RBP18.86■□□□□ 0.61
CMTM3-204ENST00000562357 DENND4CQ5VZ89 1909 aa18.86■□□□□ 0.61
CMTM3-204ENST00000562357 BIN1O00499 593 aa18.85■□□□□ 0.61
CMTM3-204ENST00000562357 TNFRSF10BO14763 440 aa18.85■□□□□ 0.61
CMTM3-204ENST00000562357 OLFM2O95897 454 aa18.85■□□□□ 0.61
CMTM3-204ENST00000562357 TUBP50607 506 aa18.85■□□□□ 0.61
CMTM3-204ENST00000562357 SLC8A3P57103 927 aa18.85■□□□□ 0.61
CMTM3-204ENST00000562357 CCINQ13939 588 aa18.85■□□□□ 0.61
CMTM3-204ENST00000562357 CBWD6Q4V339 395 aa18.85■□□□□ 0.61
CMTM3-204ENST00000562357 ZNF394Q53GI3 561 aa18.85■□□□□ 0.61
CMTM3-204ENST00000562357 CBWD3Q5JTY5 395 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms