RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 AKR1A1P14550 325 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 CHN1P15882 459 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 PECAM1P16284 738 aaPredicted RBP10.27□□□□□ -0.77
SMG1-205ENST00000561947 TAF6P49848 677 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 CDH6P55285 790 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 CDO1Q16878 200 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 RAB6CQ53S08 254 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 TAOK1Q7L7X3 1001 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 ZDHHC17Q8IUH5 632 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 CRYBG2Q8N1P7 616 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 SMG8Q8ND04 991 aaKnown RBP10.27□□□□□ -0.77
SMG1-205ENST00000561947 CFAP57Q96MR6 1250 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 XPO6Q96QU8 1125 aaKnown RBP10.27□□□□□ -0.77
SMG1-205ENST00000561947 LPIN3Q9BQK8 851 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 CALN1Q9BXU9 219 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 RAB6CQ9H0N0 254 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 ZFYVE28Q9HCC9 887 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 SAYSD1Q9NPB0 183 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMG1-205ENST00000561947 DCAF8L1A6NGE4 600 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 PAPSS1O43252 624 aaPredicted RBP10.27□□□□□ -0.77
SMG1-205ENST00000561947 GABBR2O75899 941 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 ATP5DP30049 168 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 SDC4P31431 198 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 GNL1P36915 607 aaPredicted RBP10.27□□□□□ -0.77
SMG1-205ENST00000561947 GDF10P55107 478 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 SOX4Q06945 474 aaPredicted RBP10.27□□□□□ -0.77
SMG1-205ENST00000561947 BST2Q10589 180 aaKnown RBP10.27□□□□□ -0.77
SMG1-205ENST00000561947 STAT4Q14765 748 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 SV2CQ496J9 727 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 ERMARDQ5T6L9 678 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 CHADLQ6NUI6 762 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 B4GALNT4Q76KP1 1039 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 LIMS2Q7Z4I7 341 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 PCGF5Q86SE9 256 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 EXOC3L1Q86VI1 746 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 RSAD2Q8WXG1 361 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 PRCCQ92733 491 aaPredicted RBP10.27□□□□□ -0.77
SMG1-205ENST00000561947 KHSRPQ92945 711 aaKnown RBP eCLIP10.27□□□□□ -0.772e-8■■■■■ 30
SMG1-205ENST00000561947 SNX25Q9H3E2 840 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 MYADML2A6NDP7 307 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 MCF2LO15068 1137 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 DUSP11O75319 330 aaKnown RBP10.26□□□□□ -0.77
SMG1-205ENST00000561947 SLC10A3P09131 477 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 PDGFRBP09619 1106 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 CCDC130P13994 396 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 BCAT1P54687 386 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 EIF3EP60228 445 aaKnown RBP10.26□□□□□ -0.77
SMG1-205ENST00000561947 MMRN1Q13201 1228 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 DPYSL3Q14195 570 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 CCDC142Q17RM4 750 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 CCDC38Q502W7 563 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 TAF2Q6P1X5 1199 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 SAPCD2Q86UD0 394 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 FAM228AQ86W67 206 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 SCUBE3Q8IX30 993 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 ANKRD52Q8NB46 1076 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 ARRDC4Q8NCT1 418 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 TRPV1Q8NER1 839 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 TEKT4Q8WW24 435 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 TTC25Q96NG3 672 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 MAK16Q9BXY0 300 aaKnown RBP10.26□□□□□ -0.77
SMG1-205ENST00000561947 DNAI2Q9GZS0 605 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 C10orf88Q9H8K7 445 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 GOLGA2P5Q9HBQ8 144 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 LGALS13Q9UHV8 139 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 FARP1Q9Y4F1 1045 aaPredicted RBP10.26□□□□□ -0.77
SMG1-205ENST00000561947 SCN10AQ9Y5Y9 1956 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 KPNA6O60684 536 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 DESP17661 470 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 LMO2P25791 158 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 ADORA2BP29275 332 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 INHBEP58166 350 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 ATP11AP98196 1134 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 TFDP2Q14188 446 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 KRT81Q14533 505 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 PDK2Q15119 407 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 BOLA3Q53S33 107 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 FAM47CQ5HY64 1035 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 TWF2Q6IBS0 349 aaKnown RBP10.26□□□□□ -0.77
SMG1-205ENST00000561947 SPATS2Q86XZ4 545 aaKnown RBP10.26□□□□□ -0.77
SMG1-205ENST00000561947 APPL2Q8NEU8 664 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 FAM172AQ8WUF8 416 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 ATXN2LQ8WWM7 1075 aaKnown RBP10.26□□□□□ -0.77
SMG1-205ENST00000561947 ARHGEF2Q92974 986 aaKnown RBP10.26□□□□□ -0.77
SMG1-205ENST00000561947 NCAPGQ9BPX3 1015 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 CCDC77Q9BR77 488 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 NGRNQ9NPE2 291 aaKnown RBP10.26□□□□□ -0.77
SMG1-205ENST00000561947 CYLDQ9NQC7 956 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 CTNNAL1Q9UBT7 734 aa10.26□□□□□ -0.77
SMG1-205ENST00000561947 A0A087WUV0 522 aaPredicted RBP10.25□□□□□ -0.77
SMG1-205ENST00000561947 C6orf222P0C671 652 aaPredicted RBP10.25□□□□□ -0.77
SMG1-205ENST00000561947 RBP3P10745 1247 aa10.25□□□□□ -0.77
SMG1-205ENST00000561947 CTGFP29279 349 aa10.25□□□□□ -0.77
SMG1-205ENST00000561947 RPL22P35268 128 aaKnown RBP10.25□□□□□ -0.77
SMG1-205ENST00000561947 SCNN1AP37088 669 aa10.25□□□□□ -0.77
SMG1-205ENST00000561947 RPL34P49207 117 aaKnown RBP10.25□□□□□ -0.77
SMG1-205ENST00000561947 CTCFP49711 727 aaPredicted RBP10.25□□□□□ -0.77
SMG1-205ENST00000561947 MRPS6P82932 125 aaKnown RBP10.25□□□□□ -0.77
SMG1-205ENST00000561947 NOMO1Q15155 1222 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms