RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 ITFG1Q8TB96 612 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 STK32AQ8WU08 396 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 OVCA2Q8WZ82 227 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 FGF13Q92913 245 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 RPGRIP1Q96KN7 1286 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 HSFY1Q96LI6 401 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 PDCL3Q9H2J4 239 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 IL21Q9HBE4 155 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 LRRC4Q9HBW1 653 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 TRPM5Q9NZQ8 1165 aa17.27■□□□□ 0.36
USB1-204ENST00000561568 A0A1W2PRU2 124 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 FAM92AA1XBS5 289 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 LAMP2P13473 410 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 DDX6P26196 483 aaKnown RBP eCLIP17.26■□□□□ 0.35
USB1-204ENST00000561568 GPD2P43304 727 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 SNX16P57768 344 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 USP46P62068 366 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 TAF10Q12962 218 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 SLC5A9Q2M3M2 681 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 RAB41Q5JT25 222 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 SPECC1LQ69YQ0 1117 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 GET4Q7L5D6 327 aaPredicted RBP17.26■□□□□ 0.35
USB1-204ENST00000561568 SCAMP5Q8TAC9 235 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 SHKBP1Q8TBC3 707 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 BAP1Q92560 729 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
USB1-204ENST00000561568 SECISBP2LQ93073 1101 aaKnown RBP17.26■□□□□ 0.35
USB1-204ENST00000561568 TCEAL4Q96EI5 215 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 TTYH3Q9C0H2 523 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 AIPL1Q9NZN9 384 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 CAPN11Q9UMQ6 739 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 SCML2Q9UQR0 700 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 LUC7L2Q9Y383 392 aaKnown RBP17.26■□□□□ 0.35
USB1-204ENST00000561568 CEP83Q9Y592 693 aa17.26■□□□□ 0.35
USB1-204ENST00000561568 MOSPD3O75425 235 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 ACADSBP45954 432 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 SFMBT2Q5VUG0 894 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 PMF1Q6P1K2 205 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 MON1AQ86VX9 555 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 ZDHHC14Q8IZN3 488 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 TDRD5Q8NAT2 981 aaKnown RBP17.25■□□□□ 0.35
USB1-204ENST00000561568 STKLD1Q8NE28 680 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 CPLX3Q8WVH0 158 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 FBXO32Q969P5 355 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 MCRS1Q96EZ8 462 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 NOX5Q96PH1 765 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 TASP1Q9H6P5 420 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 CYLDQ9NQC7 956 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 EPS15L1Q9UBC2 864 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 CHORDC1Q9UHD1 332 aaPredicted RBP17.25■□□□□ 0.35
USB1-204ENST00000561568 USP3Q9Y6I4 520 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 PTPRDP23468 1912 aa17.25■□□□□ 0.35
USB1-204ENST00000561568 NCANO14594 1321 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 LOC730098B7Z3J9 87 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 TPM1P09493 284 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 GJA1P17302 382 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 PFKLP17858 780 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 SSTR3P32745 418 aaPredicted RBP17.24■□□□□ 0.35
USB1-204ENST00000561568 PSEN1P49768 467 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 TKTL1P51854 596 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 ZBED6P86452 979 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 CDR2Q01850 454 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 ARID5AQ03989 594 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 IFRD2Q12894 506 aaPredicted RBP17.24■□□□□ 0.35
USB1-204ENST00000561568 TRIM14Q14142 442 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 TEAD2Q15562 447 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 SNX30Q5VWJ9 437 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 PM20D1Q6GTS8 502 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 DENND1BQ6P3S1 775 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 IRF2BP2Q7Z5L9 587 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 TMEM150AQ86TG1 271 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 NOP9Q86U38 636 aaKnown RBP17.24■□□□□ 0.35
USB1-204ENST00000561568 VSTM4Q8IW00 320 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 NPAS3Q8IXF0 933 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 TMEM35BQ8NCS4 154 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 EPS8L1Q8TE68 723 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 ING5Q8WYH8 240 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 DDX1Q92499 740 aaKnown RBP17.24■□□□□ 0.35
USB1-204ENST00000561568 SYN2Q92777 582 aaPredicted RBP17.24■□□□□ 0.35
USB1-204ENST00000561568 NXPE3Q969Y0 559 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 MYADMQ96S97 322 aa17.24■□□□□ 0.35
USB1-204ENST00000561568 TLR8Q9NR97 1041 aaKnown RBP17.24■□□□□ 0.35
USB1-204ENST00000561568 COL6A3P12111 3177 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 C2orf16Q68DN1 1984 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 ZNF840PA6NDX5 716 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 C19orf67A6NJJ6 358 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 LRRC53A6NM62 1247 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 C2CD4DB7Z1M9 353 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 TULP2O00295 520 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 AP5Z1O43299 807 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 ZBED1O96006 694 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 CEBPBP17676 345 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 WEE1P30291 646 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 RPL34P49207 117 aaKnown RBP17.23■□□□□ 0.35
USB1-204ENST00000561568 ZP2Q05996 745 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 GPR158Q5T848 1215 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 GPRIN1Q7Z2K8 1008 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 CCDC186Q7Z3E2 898 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 TMEM110Q86TL2 294 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 SIX6OS1Q8N1H7 587 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms