RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 PTPN9P43378 593 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 MRPS5P82675 430 aaKnown RBP12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 FPGSQ05932 587 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 LONRF2Q1L5Z9 754 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 CTXN3Q4LDR2 81 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 FAM171A1Q5VUB5 890 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 WDR93Q6P2C0 686 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 TMCO3Q6UWJ1 677 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 BEND5Q7L4P6 421 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 MAATS1Q7Z4T9 603 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 PHLDB2Q86SQ0 1253 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 VSIG1Q86XK7 387 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 RCOR2Q8IZ40 523 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 CCDC26Q8TAB7 109 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 SPPL2BQ8TCT7 592 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 HNRNPLLQ8WVV9 542 aaKnown RBP12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 KRT35Q92764 455 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 VWCEQ96DN2 955 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 ZNF558Q96NG5 402 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 TBCBQ99426 244 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 TTPALQ9BTX7 342 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 HTATIP2Q9BUP3 242 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 PARD6BQ9BYG5 372 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 TRIM7Q9C029 511 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 MTIF3Q9H2K0 278 aaKnown RBP12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 SLITRK6Q9H5Y7 841 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 RC3H2Q9HBD1 1191 aaKnown RBP12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 RAB21Q9UL25 225 aa12.42□□□□□ -0.42
AC087878.1-201ENST00000560709 FAM170AA1A519 330 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 TULP2O00295 520 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 PDE2AO00408 941 aaPredicted RBP12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 KRIT1O00522 736 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 LCP1P13796 627 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 H2AFXP16104 143 aaPredicted RBP12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 IGFBP6P24592 240 aaPredicted RBP12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 MAP3K7CLP57077 242 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 CREMQ03060 361 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 ZNF252P-AS1Q0IIN9 211 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 ADIGQ0VDE8 80 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 SCN5AQ14524 2016 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 USP41Q3LFD5 358 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 DCAF12L1Q5VU92 463 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 C8orf74Q6P047 294 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 LLGL2Q6P1M3 1020 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 STRADAQ7RTN6 431 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 RNF168Q8IYW5 571 aaPredicted RBP12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 LRRN4CLQ8ND94 238 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 JOSD2Q8TAC2 188 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 RXFP2Q8WXD0 754 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 SMOQ99835 787 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 DDX23Q9BUQ8 820 aaKnown RBP12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 CWH43Q9H720 699 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 ARFGAP3Q9NP61 516 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 COMMD8Q9NX08 183 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 TJP2Q9UDY2 1190 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 USTQ9Y2C2 406 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 EFR3BQ9Y2G0 817 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 PCDHB5Q9Y5E4 795 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
AC087878.1-201ENST00000560709 TET1Q8NFU7 2136 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 F8VP50 259 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 CLDN5O00501 218 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 LRCH4O75427 683 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 UPP2O95045 317 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 GJB6O95452 261 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 EFEMP2O95967 443 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 FGBP02675 491 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 RHOXF2BP0C7M4 288 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 MATKP42679 507 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 GATMP50440 423 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 TKTL1P51854 596 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 AIF1P55008 147 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 YWHAZP63104 245 aaKnown RBP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 OGDHQ02218 1023 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 ADCY1Q08828 1119 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 GPR17Q13304 367 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 SMC1AQ14683 1233 aaKnown RBP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 NAA30Q147X3 362 aaPredicted RBP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 PTPROQ16827 1216 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 BOLA3Q53S33 107 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 SPOUT1Q5T280 376 aaKnown RBP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 SLC13A5Q86YT5 568 aaPredicted RBP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 PSTKQ8IV42 348 aaKnown RBP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 SCUBE3Q8IX30 993 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 IFT20Q8IY31 132 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 NOA1Q8NC60 698 aaKnown RBP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 ZMIZ2Q8NF64 920 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 TEKT4Q8WW24 435 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 PIK3R5Q8WYR1 880 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 TSC1Q92574 1164 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 TMEM169Q96HH4 297 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 IGSF21Q96ID5 467 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 MS4A14Q96JA4 679 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 C8orf48Q96LL4 319 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 SLC2A13Q96QE2 648 aa12.4□□□□□ -0.42
AC087878.1-201ENST00000560709 SLC9A7Q96T83 725 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms