RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PYHIN1Q6K0P9 492 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 CYB5D1Q6P9G0 228 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 MTA3Q9BTC8 594 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 LNPEPQ9UIQ6 1025 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 LOC100653049A0A140TA62 436 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 GLRA3O75311 464 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 CPA2P48052 419 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 EIF4A1P60842 406 aaKnown RBP14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 CYLDQ9NQC7 956 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 FBXO28Q9NVF7 368 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 MAP3K19Q56UN5 1328 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 DENND4BO75064 1496 aaPredicted RBP14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 BNC1Q01954 994 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 ALG11Q2TAA5 492 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 SLC9A6Q92581 669 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZNF341Q9BYN7 854 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 CD248Q9HCU0 757 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 EMSYQ7Z589 1322 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 AREL1O15033 823 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 ANXA9O76027 345 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 ARL3P36405 182 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 CDC42EP1Q00587 391 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZNF846Q147U1 533 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 QPRTQ15274 297 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 SWI5Q1ZZU3 235 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZNF605Q86T29 641 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 PPIL6Q8IXY8 311 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 LRRC17Q8N6Y2 441 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM20AQ96MK3 541 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 RMDN3Q96TC7 470 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 TUBA8Q9NY65 449 aaPredicted RBP14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 HOXC10Q9NYD6 342 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 CHURC1-FNTBB4DL54 471 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 ADD2P35612 726 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 MCCD1P59942 119 aaPredicted RBP14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 CCDC153Q494R4 210 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 PPP1R18Q6NYC8 613 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 SPATA18Q8TC71 538 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 MAP4K1Q92918 833 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 LRRC1Q9BTT6 524 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 WDR41Q9HAD4 459 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 SEMA3DO95025 777 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 RTN3O95197 1032 aaPredicted RBP14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 RPS6KA3P51812 740 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 DDX39BQ13838 428 aaKnown RBP14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 TPD52L3Q96J77 140 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 NUAK2Q9H093 628 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 NMRK2Q9NPI5 230 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 VTI1BQ9UEU0 232 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 SNX12Q9UMY4 172 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZW10O43264 779 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 HLA-DQA2P01906 255 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 SPIRE1Q08AE8 756 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 EHD3Q9NZN3 535 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 ASAP1Q9ULH1 1129 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 PRRG1O14668 218 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 CD2BP2O95400 341 aaKnown RBP14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 UQCRBP14927 111 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 AKR1B1P15121 316 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 IFNAR1P17181 557 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 PNKPQ96T60 521 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 TIPINQ9BVW5 301 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 A0A087WWV3 80 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 KIAA0391O15091 583 aaKnown RBP14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 CENPCQ03188 943 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 TSPAN14Q8NG11 270 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 MCEEQ96PE7 176 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 CCDC3Q9BQI4 270 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 ATPIF1Q9UII2 106 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 EFR3AQ14156 821 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 PYDC2Q56P42 97 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 MFSD14CQ5VZR4 134 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 PCNX4Q63HM2 1172 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 B3GALNT2Q8NCR0 500 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 SCUBE2Q9NQ36 999 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 TOP2BQ02880 1626 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM92AA1XBS5 289 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 EIF3MQ7L2H7 374 aaKnown RBP14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 SLC35C2Q9NQQ7 365 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 AHSPQ9NZD4 102 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 STOML2Q9UJZ1 356 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 EDC4Q6P2E9 1401 aaKnown RBP14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 PVALEFA0A1B0GWK0 134 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 KMOO15229 486 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 MYCP01106 439 aaPredicted RBP14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 HIST1H2ABP04908 130 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 ATP1A3P13637 1013 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 AVPR1AP37288 418 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 MAD2L1Q13257 205 aaPredicted RBP14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 POLD3Q15054 466 aaPredicted RBP14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 RGS21Q2M5E4 152 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 HIST3H2AQ7L7L0 130 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 HIST1H2ACQ93077 130 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 UGT2B28Q9BY64 529 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 CMTM6Q9NX76 183 aa14.29□□□□□ -0.12
CSPG4P12-202ENST00000559989 CORO7P57737 925 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 ARHGAP15Q53QZ3 475 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 TBCELQ5QJ74 424 aa14.28□□□□□ -0.12
CSPG4P12-202ENST00000559989 DENND1BQ6P3S1 775 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms