RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PLEKHA5Q9HAU0 1116 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 NOD2Q9HC29 1040 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 PRDM8Q9NQV8 689 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 OLA1Q9NTK5 396 aaKnown RBP2.61□□□□□ -1.99
GABPB1-209ENST00000559100 BLOC1S4Q9NUP1 217 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 RNF181Q9P0P0 153 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 BCCIPQ9P287 314 aaKnown RBP eCLIP2.61□□□□□ -1.99
GABPB1-209ENST00000559100 DKK4Q9UBT3 224 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 LPAR3Q9UBY5 353 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 EIF2B4Q9UI10 523 aaKnown RBP2.61□□□□□ -1.99
GABPB1-209ENST00000559100 KCND3Q9UK17 655 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 DAPP1Q9UN19 280 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 USP22Q9UPT9 525 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 DTNAQ9Y4J8 743 aa2.61□□□□□ -1.99
GABPB1-209ENST00000559100 CARMIL2Q6F5E8 1435 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 CCDC196A0A1B0GTZ2 297 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ANKRD18BA2A2Z9 1011 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 KIF28PB7ZC32 967 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 MATN2O00339 956 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 FFAR3O14843 346 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TIMM44O43615 452 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZNF500O60304 480 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TRIM13O60858 407 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 FAM155BO75949 473 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 FARP2O94887 1054 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 RTN3O95197 1032 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 GPANK1O95872 356 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TK1P04183 234 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 PRKCBP05771 671 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 HLA-DOAP06340 250 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ANXA6P08133 673 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 HNRNPA1P09651 372 aaKnown RBP eCLIP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZSCAN22P10073 491 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 CAPN3P20807 821 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 KCNA3P22001 575 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 SERPINA4P29622 427 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 CD6P30203 668 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 MSX2P35548 267 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 RPS19P39019 145 aaKnown RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 GSTM5P46439 218 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 RXRGP48443 463 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TUBP50607 506 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 DGKEP52429 567 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZNF134P52741 427 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 CLNS1AP54105 237 aaKnown RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 EIF5P55010 431 aaKnown RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 HSD11B2P80365 405 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 NHLH2Q02577 135 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 NUCB1Q02818 461 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TLE2Q04725 743 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 DLX2Q07687 328 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 SLFN5Q08AF3 891 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 MYO1EQ12965 1108 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 PDCLQ13371 301 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ATP1A4Q13733 1029 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 BOP1Q14137 746 aaKnown RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 KRT32Q14532 448 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 GRM4Q14833 912 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TRIM71Q2Q1W2 868 aaKnown RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZNF750Q32MQ0 723 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 VWA3BQ502W6 1294 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 CERCAMQ5T4B2 595 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 DEPDC1Q5TB30 811 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 MANEALQ5VSG8 457 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ATG16L1Q676U5 607 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 HAUS3Q68CZ6 603 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZNF280DQ6N043 979 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 DRICH1Q6PGQ1 229 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 CLEC9AQ6UXN8 241 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 KRT27Q7Z3Y8 459 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TAX1BP1Q86VP1 789 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 D2HGDHQ8N465 521 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 C11orf44Q8N8P7 122 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZUFSPQ96AP4 578 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TMEM125Q96AQ2 219 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZBTB10Q96DT7 871 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZBTB45Q96K62 511 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TIGD1Q96MW7 591 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 MED15Q96RN5 788 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 SLC38A3Q99624 504 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ZSWIM1Q9BR11 485 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 SDF4Q9BRK5 362 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 PTDSS2Q9BVG9 487 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 RNPEPQ9H4A4 650 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 CXorf36Q9H7Y0 433 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 AGO3Q9H9G7 860 aaKnown RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 PREBQ9HCU5 417 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 ALG13Q9NP73 1137 aaKnown RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 KRT84Q9NSB2 600 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 TBC1D22BQ9NU19 505 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 FAM30AQ9NZY2 134 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 NDUFAF4Q9P032 175 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 DNMT3BQ9UBC3 853 aaKnown RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 NRBP1Q9UHY1 535 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 SERTAD3Q9UJW9 196 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 BAG5Q9UL15 447 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 CAPN11Q9UMQ6 739 aa2.6□□□□□ -1.99
GABPB1-209ENST00000559100 C19orf53Q9UNZ5 99 aaPredicted RBP2.6□□□□□ -1.99
GABPB1-209ENST00000559100 DERAQ9Y315 318 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms