RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 LEFTY2O00292 366 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 RTN3O95197 1032 aaPredicted RBP16.04■□□□□ 0.16
SMAD6-203ENST00000558937 OLFM2O95897 454 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 ABL1P00519 1130 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 OAS1P00973 400 aaKnown RBP16.04■□□□□ 0.16
SMAD6-203ENST00000558937 EGFP01133 1207 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 CCDC130P13994 396 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 YWHAQP27348 245 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 HOXC13P31276 330 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 ASPAP45381 313 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 GCLMP48507 274 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 NDST1P52848 882 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 SLC7A9P82251 487 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 ZXDBP98169 803 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 PPP3CAQ08209 521 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 ORC1Q13415 861 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 BECN1Q14457 450 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 ZCWPW2Q504Y3 356 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 HEATR6Q6AI08 1181 aaKnown RBP16.04■□□□□ 0.16
SMAD6-203ENST00000558937 INTS8Q75QN2 995 aaKnown RBP16.04■□□□□ 0.16
SMAD6-203ENST00000558937 FAM186BQ8IYM0 893 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 SMYD4Q8IYR2 804 aaPredicted RBP16.04■□□□□ 0.16
SMAD6-203ENST00000558937 NUP93Q8N1F7 819 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 ATP2A3Q93084 1043 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 FBXO32Q969P5 355 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 SMARCD1Q96GM5 515 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 KCNK16Q96T55 309 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 P2RY13Q9BPV8 354 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 FBRSL1Q9HCM7 1045 aaKnown RBP16.04■□□□□ 0.16
SMAD6-203ENST00000558937 DMAP1Q9NPF5 467 aaPredicted RBP16.04■□□□□ 0.16
SMAD6-203ENST00000558937 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.04■□□□□ 0.167e-6■■■■■ 74.5
SMAD6-203ENST00000558937 KRT82Q9NSB4 513 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 CPQQ9Y646 472 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 SPTBN4Q9H254 2564 aa16.04■□□□□ 0.16
SMAD6-203ENST00000558937 CFAP54Q96N23 3096 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 KRT13P13646 458 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 RPL13P26373 211 aaKnown RBP16.03■□□□□ 0.16
SMAD6-203ENST00000558937 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
SMAD6-203ENST00000558937 ID4P47928 161 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 GALK1P51570 392 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 SLC5A3P53794 718 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 PNOCQ13519 176 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 LONP2Q86WA8 852 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 UNC93AQ86WB7 457 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 FUKQ8N0W3 1084 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 PDZD8Q8NEN9 1154 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 TAS1R2Q8TE23 839 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 CCDC34Q96HJ3 373 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 RNF38Q9H0F5 515 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 LINC00597Q9H2U6 94 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 MMRN2Q9H8L6 949 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 APOBEC3GQ9HC16 384 aaKnown RBP16.03■□□□□ 0.16
SMAD6-203ENST00000558937 SMPD4Q9NXE4 827 aa16.03■□□□□ 0.16
SMAD6-203ENST00000558937 TNFRSF10BO14763 440 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 RNF40O75150 1001 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 AP1G2O75843 785 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 NFATC1O95644 943 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 DRD1P21728 446 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 ENPEPQ07075 957 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 SRSF5Q13243 272 aaKnown RBP16.02■□□□□ 0.16
SMAD6-203ENST00000558937 ADAM9Q13443 819 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 LPAL2Q16609 132 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 EDRF1Q3B7T1 1238 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 PRR23BQ6ZRT6 265 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 FMR1NBQ8N0W7 255 aaPredicted RBP16.02■□□□□ 0.16
SMAD6-203ENST00000558937 CRYBG2Q8N1P7 616 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 ZMIZ2Q8NF64 920 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 SCAMP5Q8TAC9 235 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 SLC2A14Q8TDB8 520 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 OVCA2Q8WZ82 227 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 EZH1Q92800 747 aaPredicted RBP16.02■□□□□ 0.16
SMAD6-203ENST00000558937 CD101Q93033 1021 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 SECISBP2LQ93073 1101 aaKnown RBP16.02■□□□□ 0.16
SMAD6-203ENST00000558937 EXOC4Q96A65 974 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 TWNKQ96RR1 684 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 SMOQ99835 787 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 IMPG2Q9BZV3 1241 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 FAM49BQ9NUQ9 324 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 GMEB2Q9UKD1 530 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 RAB23Q9ULC3 237 aa16.02■□□□□ 0.16
SMAD6-203ENST00000558937 DMDP11532 3685 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 SCAMP3O14828 347 aaKnown RBP16.01■□□□□ 0.15
SMAD6-203ENST00000558937 HRO43593 1189 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 MBL2P11226 248 aaPredicted RBP16.01■□□□□ 0.15
SMAD6-203ENST00000558937 HOXA6P31267 233 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 NUCB2P80303 420 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 INCA1Q0VD86 236 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 NR1H3Q13133 447 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 FILIP1Q7Z7B0 1213 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 WDR5BQ86VZ2 330 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 RMDN1Q96DB5 314 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 NIF3L1Q9GZT8 377 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 TMEM8AQ9HCN3 771 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 IL37Q9NZH6 218 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 GMIPQ9P107 970 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 CFAP97Q9P2B7 532 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 ZNF292O60281 2723 aa16.01■□□□□ 0.15
SMAD6-203ENST00000558937 ATG13O75143 517 aa16■□□□□ 0.15
SMAD6-203ENST00000558937 BEST1O76090 585 aa16■□□□□ 0.15
SMAD6-203ENST00000558937 CYP17A1P05093 508 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms