RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	MGAT5B	Q3V5L5	792 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	L1TD1	Q5T7N2	865 aa	Known RBP	7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	GPR158	Q5T848	1215 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	SDHAF4	Q5VUM1	108 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	LMBRD2	Q68DH5	695 aa	Predicted RBP	7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	C20orf204	Q6ZNR8	217 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	CCDC73	Q6ZRK6	1079 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	METTL23	Q86XA0	190 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	ARID3B	Q8IVW6	561 aa	Predicted RBP	7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	MFSD6L	Q8IWD5	586 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	YAF2	Q8IY57	180 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	KIAA2013	Q8IYS2	634 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	SYCP3	Q8IZU3	236 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	THEM5	Q8N1Q8	247 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	SUMF1	Q8NBK3	374 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	FAM3C	Q92520	227 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	DNASE1L2	Q92874	299 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	PSMG2	Q969U7	264 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	TSPAN18	Q96SJ8	248 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	NELL2	Q99435	816 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	CBWD1	Q9BRT8	395 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	OSBPL6	Q9BZF3	934 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	LMAN1L	Q9HAT1	526 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	TRPV4	Q9HBA0	871 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	PDE11A	Q9HCR9	933 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	RBM12	Q9NTZ6	932 aa	Known RBP	7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	PANK4	Q9NVE7	773 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	ABI2	Q9NYB9	513 aa	Predicted RBP	7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	C2CD2	Q9Y426	696 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	PIAS3	Q9Y6X2	628 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	MIA3	Q5JRA6	1907 aa		7.52	□□□□□ -1.2
MARK3-215	ENST00000558787	FAM229A	H3BQW9	127 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	ARNTL	O00327	626 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	STX6	O43752	255 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	IL18RAP	O95256	599 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	NID1	P14543	1247 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	CASP1	P29466	404 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	HOXD13	P35453	343 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	KPNA1	P52294	538 aa	Predicted RBP	7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	TNK2	Q07912	1038 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	BFSP1	Q12934	665 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	POSTN	Q15063	836 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	STK38	Q15208	465 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	DDR2	Q16832	855 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	TXNDC11	Q6PKC3	985 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	OSTM1	Q86WC4	334 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	BRSK2	Q8IWQ3	736 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787		Q8N3U1	123 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	PDCL2	Q8N4E4	241 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	CSGALNACT2	Q8N6G5	542 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	C1orf127	Q8N9H9	656 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	LEMD2	Q8NC56	503 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	CXorf38	Q8TB03	319 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	ATRIP	Q8WXE1	791 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	HVCN1	Q96D96	273 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	PI4K2A	Q9BTU6	479 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	SLC46A2	Q9BY10	475 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	GPR88	Q9GZN0	384 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	C2orf42	Q9NWW7	574 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	RBAK	Q9NYW8	714 aa	Predicted RBP	7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	GTSE1	Q9NYZ3	720 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	SEL1L	Q9UBV2	794 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	SIX4	Q9UIU6	781 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	FBXO4	Q9UKT5	387 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	EXOC7	Q9UPT5	735 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	MRPS17	Q9Y2R5	130 aa	Known RBP	7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	DNAH14	Q0VDD8	3507 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	CACNA1A	O00555	2505 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	PTPRJ	Q12913	1337 aa		7.52	□□□□□ -1.21
MARK3-215	ENST00000558787	DCHS1	Q96JQ0	3298 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	NCOR2	Q9Y618	2525 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	TICRR	Q7Z2Z1	1910 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	SPTBN2	O15020	2390 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	FRMD3	A2A2Y4	597 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	MAN2B1	O00754	1011 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	SPTLC2	O15270	562 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	CHAD	O15335	359 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	NCAM2	O15394	837 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	EXTL3	O43909	919 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	KIN	O60870	393 aa	Known RBP	7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	ATP2C2	O75185	946 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	PRPF40A	O75400	957 aa	Known RBP	7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	KRT19	P08727	400 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	HAPLN1	P10915	354 aa	Predicted RBP	7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	CHRNB1	P11230	501 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	HMGA1	P17096	107 aa	Known RBP	7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	CYP2F1	P24903	491 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	ABCD1	P33897	745 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	RPS9	P46781	194 aa	Known RBP	7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	ID4	P47928	161 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	NASP	P49321	788 aa	Predicted RBP	7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	TUFM	P49411	452 aa	Known RBP	7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	NUCB2	P80303	420 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	DMWD	Q09019	674 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	FCHO2	Q0JRZ9	810 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	DPYD	Q12882	1025 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	TAF12	Q16514	161 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	LPAL2	Q16609	132 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	SV2C	Q496J9	727 aa		7.51	□□□□□ -1.21
MARK3-215	ENST00000558787	ZC3H14	Q6PJT7	736 aa	Known RBP	7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms