RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 DBX2Q6ZNG2 339 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 ADGRG2Q8IZP9 1017 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 FAM177A1Q8N128 213 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-206ENST00000558739 NAT16Q8N8M0 369 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 C2orf15Q8WU43 125 aaKnown RBP12.78□□□□□ -0.36
SMAD3-206ENST00000558739 MYRFLQ96LU7 910 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 CDC6Q99741 560 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 ZDHHC5Q9C0B5 715 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 PCDHB5Q9Y5E4 795 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 SPENQ96T58 3664 aaKnown RBP12.77□□□□□ -0.36
SMAD3-206ENST00000558739 A0A0A0MRY4 1105 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 A0A1B0GTW7 788 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 MEI4A8MW99 385 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 B8ZZF3 427 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 ERVH48-1M5A8F1 160 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 PIRO00625 290 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 NDUFS2O75306 463 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 CER1O95813 267 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 CLTAP09496 248 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 ZNF883P0CG24 379 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 ADH5P11766 374 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 GNSP15586 552 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 TCF3P15923 654 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 ACAT1P24752 427 aaKnown RBP12.77□□□□□ -0.37
SMAD3-206ENST00000558739 RPA1P27694 616 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 SPATA1Q5VX52 437 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 SPACA3Q8IXA5 215 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 SNIP1Q8TAD8 396 aaKnown RBP12.77□□□□□ -0.37
SMAD3-206ENST00000558739 PLEKHA5Q9HAU0 1116 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 AK5Q9Y6K8 562 aa12.77□□□□□ -0.37
SMAD3-206ENST00000558739 ARID1BQ8NFD5 2236 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-206ENST00000558739 A0A1B0GVT2 93 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 ANO9A1A5B4 782 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 TBC1D3BA6NDS4 549 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 KCNK3O14649 394 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 CLDN3O15551 220 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 RRP8O43159 456 aaKnown RBP12.76□□□□□ -0.37
SMAD3-206ENST00000558739 MCM7P33993 719 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 KRT2P35908 639 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 EIF2DP41214 584 aaKnown RBP12.76□□□□□ -0.37
SMAD3-206ENST00000558739 MATR3P43243 847 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMAD3-206ENST00000558739 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 FOSBP53539 338 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 USP46P62068 366 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 IL9RQ01113 521 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 WDR45BQ5MNZ6 344 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 LY6G5CQ5SRR4 150 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 C10orf76Q5T2E6 689 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 ETFBKMTQ8IXQ9 262 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
SMAD3-206ENST00000558739 DNASE2BQ8WZ79 361 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 TOE1Q96GM8 510 aaKnown RBP12.76□□□□□ -0.37
SMAD3-206ENST00000558739 MRGPRX1Q96LB2 322 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 TRIM9Q9C026 710 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 RNF38Q9H0F5 515 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 CPNE5Q9HCH3 593 aa12.76□□□□□ -0.37
SMAD3-206ENST00000558739 UXTQ9UBK9 157 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-206ENST00000558739 KCNJ18B7U540 433 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 BCAT2O15382 392 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-206ENST00000558739 TNFSF14O43557 240 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 BRINP1O60477 761 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 ZNF217O75362 1048 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 TULP3O75386 442 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 MAPTP10636 758 aaKnown RBP12.75□□□□□ -0.37
SMAD3-206ENST00000558739 NCAM1P13591 858 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 RAD51AP2Q09MP3 1159 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 KIF19Q2TAC6 998 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 SCARA3Q6AZY7 606 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 KIAA1324Q6UXG2 1013 aaKnown RBP12.75□□□□□ -0.37
SMAD3-206ENST00000558739 USP49Q70CQ1 688 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 TMEM161BQ8NDZ6 487 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 PKMYT1Q99640 499 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 GPR174Q9BXC1 333 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 CFAP97Q9P2B7 532 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 CPQQ9Y646 472 aa12.75□□□□□ -0.37
SMAD3-206ENST00000558739 C2CD3Q4AC94 2353 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 CSMD1Q96PZ7 3565 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 CTDNEP1O95476 244 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 ADH1CP00326 375 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 C6P13671 934 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 NTSR1P30989 418 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 CSNK1EP49674 416 aaKnown RBP12.74□□□□□ -0.37
SMAD3-206ENST00000558739 COLEC12Q5KU26 742 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 C6orf118Q5T5N4 469 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 DCAF12L1Q5VU92 463 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 ERICH1Q86X53 443 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 METTL23Q86XA0 190 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 CACUL1Q86Y37 369 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 SCN4BQ8IWT1 228 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 DCP1BQ8IZD4 617 aaKnown RBP12.74□□□□□ -0.37
SMAD3-206ENST00000558739 THEM5Q8N1Q8 247 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 TERB1Q8NA31 727 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 C1orf216Q8TAB5 229 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 FOXJ1Q92949 421 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 NAF1Q96HR8 494 aaKnown RBP12.74□□□□□ -0.37
SMAD3-206ENST00000558739 FAM84AQ96KN4 292 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 DRC1Q96MC2 740 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 KIF2CQ99661 725 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms