RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 C12orf50Q8NA57 414 aaPredicted RBP12.28□□□□□ -0.44
CASC4-205ENST00000558735 KDF1Q8NAX2 398 aaPredicted RBP12.28□□□□□ -0.44
CASC4-205ENST00000558735 SH3RF2Q8TEC5 729 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 TMEM174Q8WUU8 243 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 OSCP1Q8WVF1 389 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 EZH1Q92800 747 aaPredicted RBP12.28□□□□□ -0.44
CASC4-205ENST00000558735 ELMO3Q96BJ8 720 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 C8orf48Q96LL4 319 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 TTLL2Q9BWV7 592 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 B3GNT5Q9BYG0 378 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 KCTD10Q9H3F6 313 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 RXFP3Q9NSD7 469 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 POLR3BQ9NW08 1133 aaPredicted RBP12.28□□□□□ -0.44
CASC4-205ENST00000558735 DUS2Q9NX74 493 aaKnown RBP12.28□□□□□ -0.44
CASC4-205ENST00000558735 NXF1Q9UBU9 619 aaKnown RBP12.28□□□□□ -0.44
CASC4-205ENST00000558735 WNT6Q9Y6F9 365 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 GREB1Q4ZG55 1949 aa12.28□□□□□ -0.44
CASC4-205ENST00000558735 DSPP15924 2871 aaKnown RBP12.28□□□□□ -0.44
CASC4-205ENST00000558735 NBEAQ8NFP9 2946 aa12.27□□□□□ -0.44
CASC4-205ENST00000558735 RALGAPA1Q6GYQ0 2036 aa12.27□□□□□ -0.44
CASC4-205ENST00000558735 ZNF840PA6NDX5 716 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 LRRIQ3A6PVS8 624 aaPredicted RBP12.27□□□□□ -0.45
CASC4-205ENST00000558735 A8MXQ7 604 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 PHACTR2O75167 634 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 KCNK5O95279 499 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 VNN1O95497 513 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 TCF3P15923 654 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 TNNC1P63316 161 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 NOP14P78316 857 aaKnown RBP12.27□□□□□ -0.45
CASC4-205ENST00000558735 DLG4P78352 724 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 AMPD2Q01433 879 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 TDRD10Q5VZ19 366 aaKnown RBP12.27□□□□□ -0.45
CASC4-205ENST00000558735 PAQR9Q6ZVX9 377 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 TTC16Q8NEE8 873 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 GOLGA5Q8TBA6 731 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 SYAP1Q96A49 352 aaPredicted RBP12.27□□□□□ -0.45
CASC4-205ENST00000558735 P2RY13Q9BPV8 354 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 ZNF518BQ9C0D4 1074 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 ARRDC1-AS1Q9H2J1 176 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 VRTNQ9H8Y1 702 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 TRPM5Q9NZQ8 1165 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 ARHGAP26Q9UNA1 814 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 WASF3Q9UPY6 502 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 HPSEQ9Y251 543 aa12.27□□□□□ -0.45
CASC4-205ENST00000558735 KIF26AQ9ULI4 1882 aaPredicted RBP12.27□□□□□ -0.45
CASC4-205ENST00000558735 ATG2BQ96BY7 2078 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 PDXKO00764 312 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 TRIM66O15016 1216 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 AXIN1O15169 862 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 RPP40O75818 363 aaKnown RBP12.26□□□□□ -0.45
CASC4-205ENST00000558735 PFKFB1P16118 471 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 PFKLP17858 780 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 DRD1P21728 446 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 ANXA13P27216 316 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 PXNP49023 591 aaPredicted RBP12.26□□□□□ -0.45
CASC4-205ENST00000558735 AP3M2P53677 418 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 TAF10Q12962 218 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 USP4Q13107 963 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 NCOA4Q13772 614 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 KCNB1Q14721 858 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 ADGRG2Q8IZP9 1017 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 CPA6Q8N4T0 437 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 B3GALNT2Q8NCR0 500 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 KCNK16Q96T55 309 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 SDCBP2Q9H190 292 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 VPS45Q9NRW7 570 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 EXOC1Q9NV70 894 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 USP25Q9UHP3 1055 aa12.26□□□□□ -0.45
CASC4-205ENST00000558735 RALYQ9UKM9 306 aaKnown RBP12.26□□□□□ -0.45
CASC4-205ENST00000558735 ZNF638Q14966 1978 aaKnown RBP12.26□□□□□ -0.45
CASC4-205ENST00000558735 SDK1Q7Z5N4 2213 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 IGF2RP11717 2491 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 FAM237AA0A1B0GTK4 181 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 LEFTY2O00292 366 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 ATG13O75143 517 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 RNF40O75150 1001 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 ABL1P00519 1130 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 PPP3CCP48454 512 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 IFNAR2P48551 515 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 SLC7A9P82251 487 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 NR1H3Q13133 447 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 BIRC3Q13489 604 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 COL9A2Q14055 689 aaPredicted RBP12.25□□□□□ -0.45
CASC4-205ENST00000558735 ZNF667Q5HYK9 610 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 C1orf220Q5T0J3 134 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 KBTBD6Q86V97 674 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 NUP93Q8N1F7 819 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 TMC2Q8TDI7 906 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 CD101Q93033 1021 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 ATP2A3Q93084 1043 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 SPATA32Q96LK8 384 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 ELOVL4Q9GZR5 314 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 SMYD3Q9H7B4 428 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 IL37Q9NZH6 218 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 EHD2Q9NZN4 543 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 CHORDC1Q9UHD1 332 aaPredicted RBP12.25□□□□□ -0.45
CASC4-205ENST00000558735 OBSL1O75147 1896 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 ANAPC1Q9H1A4 1944 aa12.25□□□□□ -0.45
CASC4-205ENST00000558735 AKAP13Q12802 2813 aa12.24□□□□□ -0.45
CASC4-205ENST00000558735 TMEM8BA6NDV4 472 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms