RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 RB1P06400 928 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 SMARCB1Q12824 385 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 SLC39A12Q504Y0 691 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 DCUN1D2Q6PH85 259 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 PEX26Q7Z412 305 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 PIGZQ86VD9 579 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 PIK3R5Q8WYR1 880 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 B3GALT6Q96L58 329 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 PLVAPQ9BX97 442 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 VN1R3Q9BXE9 311 aa24.98■■□□□ 1.59
SIX4-203ENST00000556952 ALG13Q9NP73 1137 aaKnown RBP24.98■■□□□ 1.59
SIX4-203ENST00000556952 GRM6O15303 877 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 SCNN1AP37088 669 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 MAP3K7CLP57077 242 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 TUBB2AQ13885 445 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 CFAP221Q4G0U5 840 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 FAM183BPQ6ZVS7 135 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 TAS1R1Q7RTX1 841 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 MCEEQ96PE7 176 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 SMOQ99835 787 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 C11orf84Q9BUA3 381 aaPredicted RBP24.97■■□□□ 1.59
SIX4-203ENST00000556952 TUBB2BQ9BVA1 445 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 PNPLA8Q9NP80 782 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 DMAP1Q9NPF5 467 aaPredicted RBP24.97■■□□□ 1.59
SIX4-203ENST00000556952 AMFRQ9UKV5 643 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 TMEM191CA6NGB0 347 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 GOLGA8SH3BPF8 625 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 BEST1O76090 585 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 URI1O94763 535 aaPredicted RBP24.97■■□□□ 1.59
SIX4-203ENST00000556952 KRT3P12035 628 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 BDNFP23560 247 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 MESDQ14696 234 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 FAM102AQ5T9C2 384 aaPredicted RBP24.97■■□□□ 1.59
SIX4-203ENST00000556952 OR6B2Q6IFH4 312 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 DDX53Q86TM3 631 aaKnown RBP24.97■■□□□ 1.59
SIX4-203ENST00000556952 NT5DC3Q86UY8 548 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 GAS2L1Q99501 681 aaPredicted RBP24.97■■□□□ 1.59
SIX4-203ENST00000556952 MTRRQ9UBK8 725 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 IP6K2Q9UHH9 426 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 BACE2Q9Y5Z0 518 aa24.97■■□□□ 1.59
SIX4-203ENST00000556952 OR4Q2P0C623 313 aa24.96■■□□□ 1.59
SIX4-203ENST00000556952 AMPD2Q01433 879 aa24.96■■□□□ 1.59
SIX4-203ENST00000556952 KIAA1841Q6NSI8 718 aa24.96■■□□□ 1.59
SIX4-203ENST00000556952 OLFML1Q6UWY5 402 aa24.96■■□□□ 1.59
SIX4-203ENST00000556952 FNIP1Q8TF40 1166 aa24.96■■□□□ 1.59
SIX4-203ENST00000556952 TLR10Q9BXR5 811 aa24.96■■□□□ 1.59
SIX4-203ENST00000556952 GOLPH3Q9H4A6 298 aa24.96■■□□□ 1.59
SIX4-203ENST00000556952 METTL5Q9NRN9 209 aaKnown RBP24.96■■□□□ 1.59
SIX4-203ENST00000556952 ALG6Q9Y672 507 aa24.96■■□□□ 1.59
SIX4-203ENST00000556952 PAPSS1O43252 624 aaPredicted RBP24.95■■□□□ 1.58
SIX4-203ENST00000556952 FGF18O76093 207 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 FOSL2P15408 326 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 PRLRP16471 622 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 IGFBP4P22692 258 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 DNAJB1P25685 340 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 MAN1A1P33908 653 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 SLC1A1P43005 524 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 GLUD2P49448 558 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 RPL7AP62424 266 aaKnown RBP24.95■■□□□ 1.58
SIX4-203ENST00000556952 SLC6A3Q01959 620 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 DSG1Q02413 1049 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 PSMD5Q16401 504 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 ZMIZ2Q8NF64 920 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.95■■□□□ 1.58
SIX4-203ENST00000556952 C2orf15Q8WU43 125 aaKnown RBP24.95■■□□□ 1.58
SIX4-203ENST00000556952 RIN2Q8WYP3 895 aaPredicted RBP24.95■■□□□ 1.58
SIX4-203ENST00000556952 BTBD6Q96KE9 485 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 LRRC4Q9HBW1 653 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 SNX12Q9UMY4 172 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 HYOU1Q9Y4L1 999 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 PCDHB5Q9Y5E4 795 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 SAR1BQ9Y6B6 198 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 PRUNE2Q8WUY3 3088 aa24.95■■□□□ 1.58
SIX4-203ENST00000556952 PIK3R2O00459 728 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 GABBR2O75899 941 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 PROSCO94903 275 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 CSPG5O95196 566 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 CPB1P15086 417 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 CACNA2D1P54289 1103 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 GPR17Q13304 367 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 RPS6KA1Q15418 735 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 SLC8B1Q6J4K2 584 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 VSTM1Q6UX27 236 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 GPR65Q8IYL9 337 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 SPPL3Q8TCT6 385 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 TRIM7Q9C029 511 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 TMEM30AQ9NV96 361 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 MTCH2Q9Y6C9 303 aa24.94■■□□□ 1.58
SIX4-203ENST00000556952 TMEM110-MUSTN1A8MSY1 372 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 MIF4GDA9UHW6 222 aaKnown RBP24.93■■□□□ 1.58
SIX4-203ENST00000556952 FBXO21O94952 628 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 GJB6O95452 261 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 LCP1P13796 627 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 TCP1P17987 556 aaKnown RBP24.93■■□□□ 1.58
SIX4-203ENST00000556952 MAGEA11P43364 429 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 KRT17Q04695 432 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 ADIGQ0VDE8 80 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 CAMK1Q14012 370 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 RAB41Q5JT25 222 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 PRSS55Q6UWB4 352 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms