RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 TMEM63CQ9P1W3 806 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 CCL26Q9Y258 94 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 MYO16Q9Y6X6 1858 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 F5P12259 2224 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 C2orf78A6NCI8 922 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 HHLA1C9JL84 531 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 ARNTLO00327 626 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 USP17L7P0C7H9 530 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 COL9A1P20849 921 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 CLCN5P51795 746 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 VCPP55072 806 aaKnown RBP24.18■■□□□ 1.46
TDP1-216ENST00000556867 STARD6P59095 220 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 PRKCQQ04759 706 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 SLC44A4Q53GD3 710 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 ASTLQ6HA08 431 aaPredicted RBP24.18■■□□□ 1.46
TDP1-216ENST00000556867 PHLDB3Q6NSJ2 640 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 FLCNQ8NFG4 579 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 SHDQ96IW2 340 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 SLC22A12Q96S37 553 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 TBC1D17Q9HA65 648 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 NFE2L3Q9Y4A8 694 aa24.18■■□□□ 1.46
TDP1-216ENST00000556867 CKMP06732 381 aa24.17■■□□□ 1.46
TDP1-216ENST00000556867 ARHGAP29Q52LW3 1261 aa24.17■■□□□ 1.46
TDP1-216ENST00000556867 TRIM65Q6PJ69 517 aa24.17■■□□□ 1.46
TDP1-216ENST00000556867 TMEM270Q6UE05 265 aa24.17■■□□□ 1.46
TDP1-216ENST00000556867 GBP6Q6ZN66 633 aa24.17■■□□□ 1.46
TDP1-216ENST00000556867 RRAGAQ7L523 313 aa24.17■■□□□ 1.46
TDP1-216ENST00000556867 ARL14EPQ8N8R7 260 aaPredicted RBP24.17■■□□□ 1.46
TDP1-216ENST00000556867 JAKMIP2Q96AA8 810 aa24.17■■□□□ 1.46
TDP1-216ENST00000556867 FBXO44Q9H4M3 255 aa24.17■■□□□ 1.46
TDP1-216ENST00000556867 SAMSN1Q9NSI8 373 aaKnown RBP24.17■■□□□ 1.46
TDP1-216ENST00000556867 HCN4Q9Y3Q4 1203 aa24.17■■□□□ 1.46
TDP1-216ENST00000556867 OLFM2O95897 454 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 OAS1P00973 400 aaKnown RBP24.16■■□□□ 1.46
TDP1-216ENST00000556867 PAEPP09466 180 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 HDCP19113 662 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 AVPR2P30518 371 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 PLCB2Q00722 1185 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 SGO2Q562F6 1265 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 HSP90AA4PQ58FG1 418 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 C11orf57Q6ZUT1 292 aaPredicted RBP24.16■■□□□ 1.46
TDP1-216ENST00000556867 GPRIN1Q7Z2K8 1008 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 KREMEN1Q96MU8 473 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 CYP2S1Q96SQ9 504 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 TUBGCP2Q9BSJ2 902 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 CRACR2AQ9BSW2 395 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 DDX23Q9BUQ8 820 aaKnown RBP24.16■■□□□ 1.46
TDP1-216ENST00000556867 KIAA1257Q9ULG3 409 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 ARHGAP26Q9UNA1 814 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 PCDHB4Q9Y5E5 795 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 MUC6Q6W4X9 2439 aa24.16■■□□□ 1.46
TDP1-216ENST00000556867 COL4A3Q01955 1670 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 KCNJ18B7U540 433 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 ZDHHC11BP0C7U3 371 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 VDRP11473 427 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 CD19P15391 556 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 TCF3P15923 654 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 AOC1P19801 751 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 EEF1GP26641 437 aaKnown RBP24.15■■□□□ 1.46
TDP1-216ENST00000556867 USP4Q13107 963 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 KCNJ12Q14500 433 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 EXOC3L4Q17RC7 722 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 MIIPQ5JXC2 388 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 SNX30Q5VWJ9 437 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 TMEM105Q8N8V8 129 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 ANKRD52Q8NB46 1076 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 RIN3Q8TB24 985 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 HEBP1Q9NRV9 189 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 THG1LQ9NWX6 298 aaKnown RBP24.15■■□□□ 1.46
TDP1-216ENST00000556867 GMIPQ9P107 970 aa24.15■■□□□ 1.46
TDP1-216ENST00000556867 PRKCSHP14314 528 aaPredicted RBP24.14■■□□□ 1.45
TDP1-216ENST00000556867 SLC9A1P19634 815 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 RFX1P22670 979 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 TUBP50607 506 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 ZNF132P52740 706 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 ZNF77Q15935 545 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 GOLGA7BQ2TAP0 167 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 VWA3BQ502W6 1294 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 TCP11X2Q5H9J9 407 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 CDKAL1Q5VV42 579 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 TPRG1Q6ZUI0 275 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 ENOSF1Q7L5Y1 443 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 TTC30AQ86WT1 665 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 RBBP8NLQ8NC74 664 aaPredicted RBP24.14■■□□□ 1.45
TDP1-216ENST00000556867 FAM81BQ96LP2 452 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 UBXN6Q9BZV1 441 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 NDST4Q9H3R1 872 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 UBE2TQ9NPD8 197 aaPredicted RBP24.14■■□□□ 1.45
TDP1-216ENST00000556867 TSPAN16Q9UKR8 245 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 CNTN6Q9UQ52 1028 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 SCML2Q9UQR0 700 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 MIA3Q5JRA6 1907 aa24.14■■□□□ 1.45
TDP1-216ENST00000556867 RNF225M0QZC1 329 aaPredicted RBP24.13■■□□□ 1.45
TDP1-216ENST00000556867 O00370 1275 aa24.13■■□□□ 1.45
TDP1-216ENST00000556867 ABL1P00519 1130 aa24.13■■□□□ 1.45
TDP1-216ENST00000556867 KIF11P52732 1056 aa24.13■■□□□ 1.45
TDP1-216ENST00000556867 BCAT1P54687 386 aa24.13■■□□□ 1.45
TDP1-216ENST00000556867 SLC7A9P82251 487 aa24.13■■□□□ 1.45
TDP1-216ENST00000556867 CAVIN1Q6NZI2 390 aaKnown RBP24.13■■□□□ 1.45
TDP1-216ENST00000556867 ZFYVE19Q96K21 471 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms