RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 ABCB6Q9NP58 842 aa9.35□□□□□ -0.91
PRKCH-222ENST00000556778 ASAH2Q9NR71 780 aa9.35□□□□□ -0.91
PRKCH-222ENST00000556778 KRT82Q9NSB4 513 aa9.35□□□□□ -0.91
PRKCH-222ENST00000556778 PRKAG3Q9UGI9 489 aa9.35□□□□□ -0.91
PRKCH-222ENST00000556778 CHORDC1Q9UHD1 332 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-222ENST00000556778 DNAJC12Q9UKB3 198 aa9.35□□□□□ -0.91
PRKCH-222ENST00000556778 CDH7Q9ULB5 785 aa9.35□□□□□ -0.91
PRKCH-222ENST00000556778 FAM50BQ9Y247 325 aa9.35□□□□□ -0.91
PRKCH-222ENST00000556778 MUC3AQ02505 3323 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 NCANO14594 1321 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 HHLA1C9JL84 531 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 FOXN3O00409 490 aaPredicted RBP9.34□□□□□ -0.91
PRKCH-222ENST00000556778 DLL1O00548 723 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 TNFRSF10BO14763 440 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 NARSO43776 548 aaKnown RBP9.34□□□□□ -0.91
PRKCH-222ENST00000556778 TADA3O75528 432 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 NOL4O94818 638 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 KRT5P13647 590 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 CD19P15391 556 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
PRKCH-222ENST00000556778 USP8P40818 1118 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 VIPR2P41587 438 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 MAGEA11P43364 429 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 RPL10AP62906 217 aaKnown RBP9.34□□□□□ -0.91
PRKCH-222ENST00000556778 MAPRE1Q15691 268 aaKnown RBP9.34□□□□□ -0.91
PRKCH-222ENST00000556778 TAF12Q16514 161 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 KLHDC7AQ5VTJ3 777 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 TXNDC8Q6A555 127 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 TANGO2Q6ICL3 276 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 CLEC20AQ6ZU45 233 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 OTOP3Q7RTS5 596 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 TTC30AQ86WT1 665 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 ELMOD1Q8N336 334 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 TDRD5Q8NAT2 981 aaKnown RBP9.34□□□□□ -0.91
PRKCH-222ENST00000556778 RBBP8NLQ8NC74 664 aaPredicted RBP9.34□□□□□ -0.91
PRKCH-222ENST00000556778 NDRG1Q92597 394 aaKnown RBP9.34□□□□□ -0.91
PRKCH-222ENST00000556778 C8orf48Q96LL4 319 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 SLC22A12Q96S37 553 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 KXD1Q9BQD3 176 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 LSM14BQ9BX40 385 aaKnown RBP9.34□□□□□ -0.91
PRKCH-222ENST00000556778 EPHX3Q9H6B9 360 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 KCNK12Q9HB15 430 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 APEX2Q9UBZ4 518 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 NUMBLQ9Y6R0 609 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 SCN1AP35498 2009 aa9.34□□□□□ -0.91
PRKCH-222ENST00000556778 TRIP11Q15643 1979 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 GTPBP10A4D1E9 387 aaKnown RBP9.33□□□□□ -0.92
PRKCH-222ENST00000556778 RNF223E7ERA6 249 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 PIK3R2O00459 728 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 CYP26A1O43174 497 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 FCARP24071 287 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 TBXAS1P24557 533 aaPredicted RBP9.33□□□□□ -0.92
PRKCH-222ENST00000556778 GGCXP38435 758 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 ZNF132P52740 706 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 GCNT1Q02742 428 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 GUCA2AQ02747 115 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 UBXN1Q04323 297 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 TAF10Q12962 218 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 VEPH1Q14D04 833 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 SYCP1Q15431 976 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 GOLGA7BQ2TAP0 167 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 GPR158Q5T848 1215 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 ARHGAP17Q68EM7 881 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 DENND5BQ6ZUT9 1274 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 ITIH5Q86UX2 942 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 ZDHHC14Q8IZN3 488 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 SLC44A3Q8N4M1 653 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 RNF214Q8ND24 703 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 RIN3Q8TB24 985 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 SMARCD1Q96GM5 515 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 FAXDC2Q96IV6 333 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 SPATA17Q96L03 361 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 SPSB2Q99619 263 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 NAA15Q9BXJ9 866 aaKnown RBP9.33□□□□□ -0.92
PRKCH-222ENST00000556778 DUSP16Q9BY84 665 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 CSNK1G1Q9HCP0 422 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 AVENQ9NQS1 362 aaPredicted RBP9.33□□□□□ -0.92
PRKCH-222ENST00000556778 FAM207AQ9NSI2 230 aaPredicted RBP9.33□□□□□ -0.92
PRKCH-222ENST00000556778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.33□□□□□ -0.92
PRKCH-222ENST00000556778 EPS15L1Q9UBC2 864 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 TSPAN16Q9UKR8 245 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 CNTN6Q9UQ52 1028 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 CCL26Q9Y258 94 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 USTQ9Y2C2 406 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 SIK3Q9Y2K2 1263 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 NR2E1Q9Y466 385 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 ASB3Q9Y575 518 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 PLXNA3P51805 1871 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 MYO9BQ13459 2157 aa9.33□□□□□ -0.92
PRKCH-222ENST00000556778 PDCD11Q14690 1871 aaKnown RBP9.32□□□□□ -0.92
PRKCH-222ENST00000556778 C2orf78A6NCI8 922 aa9.32□□□□□ -0.92
PRKCH-222ENST00000556778 SMTNL1A8MU46 457 aa9.32□□□□□ -0.92
PRKCH-222ENST00000556778 LGALS16A8MUM7 142 aa9.32□□□□□ -0.92
PRKCH-222ENST00000556778 ANHXE9PGG2 379 aa9.32□□□□□ -0.92
PRKCH-222ENST00000556778 TNFRSF10AO00220 468 aa9.32□□□□□ -0.92
PRKCH-222ENST00000556778 O00370 1275 aa9.32□□□□□ -0.92
PRKCH-222ENST00000556778 ZNF197O14709 1029 aa9.32□□□□□ -0.92
PRKCH-222ENST00000556778 MICAL2O94851 1124 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms