RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 YME1L1Q96TA2 773 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CTRCQ99895 268 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CARD6Q9BX69 1037 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CALN1Q9BXU9 219 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CRNKL1Q9BZJ0 848 aaKnown RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 LSG1Q9H089 658 aaKnown RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 LY9Q9HBG7 655 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 MOV10Q9HCE1 1003 aaKnown RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 IL1RAPL2Q9NP60 686 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 GIMAP2Q9UG22 337 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 ADGRE2Q9UHX3 823 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 POLR3KQ9Y2Y1 108 aaPredicted RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 HEY1Q9Y5J3 304 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 TRPV2Q9Y5S1 764 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CSADQ9Y600 493 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 PMF1-BGLAPU3KQ54 211 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CDHR2Q9BYE9 1310 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 PRR36Q9H6K5 1346 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 WDR7Q9Y4E6 1490 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 RAB3GAP2Q9H2M9 1393 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 KIAA0586Q9BVV6 1533 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 CYP3A7-CYP3A51PA0A087WV96 503 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 C15orf38-AP3S2A0A0A6YYH1 394 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 HEATR9A2RTY3 570 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 ALG1L2C9J202 215 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 RNF225M0QZC1 329 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 FBP2O00757 339 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 PER2O15055 1255 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 PFDN6O15212 129 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 RIPK2O43353 540 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 NDUFA2O43678 99 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 TLR2O60603 784 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 DKC1O60832 514 aaKnown RBP eCLIP6.47□□□□□ -1.37
TDP1-215ENST00000556498 CNOT3O75175 753 aaKnown RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 SEC31AO94979 1220 aaKnown RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 CCNDBP1O95273 360 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 SNAPINO95295 136 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 FGRP09769 529 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 IFIT1P09914 478 aaKnown RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 ACTN1P12814 892 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 ACADSP16219 412 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 ITGA2P17301 1181 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 PTGS1P23219 599 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 SP100P23497 879 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 CYP3A7P24462 503 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 TYK2P29597 1187 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 IREB2P48200 963 aaKnown RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 GSSP48637 474 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 HARS2P49590 506 aaKnown RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 CDKN1CP49918 316 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 ADCY7P51828 1080 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 PMS1P54277 932 aaKnown RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 GPR85P60893 370 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 CYP4F8P98187 520 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 ATP8B2P98198 1209 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 PPP2R2BQ00005 443 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 BEX3Q00994 111 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 KCNAB2Q13303 367 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 DOC2AQ14183 400 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 DMC1Q14565 340 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 ZNF268Q14587 947 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 MBTPS1Q14703 1052 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 KPNB1Q14974 876 aaKnown RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 ACCSLQ4AC99 568 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 KRTCAP3Q53RY4 240 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 ALS2CLQ60I27 953 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 IL31Q6EBC2 164 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 Q6ZNX1 250 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 CYP4V2Q6ZWL3 525 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 CACNA2D4Q7Z3S7 1137 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 TBC1D1Q86TI0 1168 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 ERO1BQ86YB8 467 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 HID1Q8IV36 788 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 MB21D2Q8IYB1 491 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 CCNYL1Q8N7R7 359 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 C2CD4AQ8NCU7 369 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 DENND6BQ8NEG7 585 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 LPCAT1Q8NF37 534 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 EXD1Q8NHP7 514 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 FNDC8Q8TC99 324 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 ZNF560Q96MR9 790 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 CLIC6Q96NY7 704 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 RMDN3Q96TC7 470 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 PSD2Q9BQI7 771 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 CEP41Q9BYV8 373 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 TMEM168Q9H0V1 697 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 OR51B5Q9H339 312 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 GSX1Q9H4S2 264 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 PALMDQ9NP74 551 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 PRDM5Q9NQX1 630 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 GLRX2Q9NS18 164 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 SAGE1Q9NXZ1 904 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 UBA2Q9UBT2 640 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 FBXO40Q9UH90 709 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 CHORDC1Q9UHD1 332 aaPredicted RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 DPP7Q9UHL4 492 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.47□□□□□ -1.37
TDP1-215ENST00000556498 IFT52Q9Y366 437 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms