RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CFAP97Q9P2B7 532 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 LIMCH1Q9UPQ0 1083 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 SNX9Q9Y5X1 595 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 CPQQ9Y646 472 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 HELZP42694 1942 aaKnown RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 TBC1D3BA6NDS4 549 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 HCRTO43612 131 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 MAGEA11P43364 429 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 TNFRSF4P43489 277 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 KIR2DL1P43626 348 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 PSMC1P62191 440 aaKnown RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 BTBD8Q5XKL5 378 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 MCTP1Q6DN14 999 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 CCNI2Q6ZMN8 369 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 TRMT11Q7Z4G4 463 aaKnown RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 OSTM1Q86WC4 334 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 NT5DC4Q86YG4 428 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 NAXDQ8IW45 347 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 ADGRG2Q8IZP9 1017 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 NOC3LQ8WTT2 800 aaKnown RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 ADAMTS14Q8WXS8 1223 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 ERLEC1Q96DZ1 483 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 HSPA12BQ96MM6 686 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 PKMYT1Q99640 499 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 DNAAF2Q9NVR5 837 aaKnown RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 MAGEC2Q9UBF1 373 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 APOBEC2Q9Y235 224 aaKnown RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 R3HCC1Q9Y3T6 440 aaKnown RBP14.9□□□□□ -0.02
ACTN1-219ENST00000556432 ANAPC1Q9H1A4 1944 aa14.9□□□□□ -0.02
ACTN1-219ENST00000556432 LAMA5O15230 3695 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 NDUFS2O75306 463 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 PFKLP17858 780 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 GABRG2P18507 467 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 PLCG1P19174 1290 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 BDNFP23560 247 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 WASP42768 502 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 LHX1P48742 406 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 ZNF131P52739 623 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 GTF2BQ00403 316 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 CYP27A1Q02318 531 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 SLC14A1Q13336 389 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 RHBDF2Q6PJF5 856 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 DENND5BQ6ZUT9 1274 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 CSGALNACT2Q8N6G5 542 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 ZNF513Q8N8E2 541 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-219ENST00000556432 NAT16Q8N8M0 369 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 C1orf127Q8N9H9 656 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 TRIML1Q8N9V2 468 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 CACTINQ8WUQ7 758 aaKnown RBP14.89□□□□□ -0.03
ACTN1-219ENST00000556432 MYLPFQ96A32 169 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 CALML4Q96GE6 196 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 FAM213AQ9BRX8 229 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 CYP8B1Q9UNU6 501 aa14.89□□□□□ -0.03
ACTN1-219ENST00000556432 HELZ2Q9BYK8 2649 aaKnown RBP14.89□□□□□ -0.03
ACTN1-219ENST00000556432 PLXND1Q9Y4D7 1925 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 A0A1W2PQD8 194 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 ATP2C2O75185 946 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 MBL2P11226 248 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-219ENST00000556432 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-219ENST00000556432 HOXB2P14652 356 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 GNSP15586 552 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 USP46P62068 366 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 SLC7A9P82251 487 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 IFRD2Q12894 506 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-219ENST00000556432 MCM6Q14566 821 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 C10orf76Q5T2E6 689 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 SYCP2LQ5T4T6 812 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 CRELD2Q6UXH1 353 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-219ENST00000556432 NUDT18Q6ZVK8 323 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 DDX42Q86XP3 938 aaKnown RBP eCLIP14.88□□□□□ -0.03
ACTN1-219ENST00000556432 SLC41A1Q8IVJ1 513 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 LRRC52Q8N7C0 313 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 FAM84AQ96KN4 292 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 SPATA17Q96L03 361 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 BBC3Q96PG8 261 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-219ENST00000556432 SYT15Q9BQS2 421 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 IKZF4Q9H2S9 585 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 EHD2Q9NZN4 543 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 SUSD2Q9UGT4 822 aa14.88□□□□□ -0.03
ACTN1-219ENST00000556432 PCDH15Q96QU1 1955 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 IGHV1OR15-9A0A0B4J2B8 117 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 ZNF840PA6NDX5 716 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 ZNF217O75362 1048 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 UBA7P41226 1012 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 POU5F1Q01860 360 aaKnown RBP14.87□□□□□ -0.03
ACTN1-219ENST00000556432 POSTNQ15063 836 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 PREPLQ4J6C6 727 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-219ENST00000556432 LY6G5CQ5SRR4 150 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 VSTM1Q6UX27 236 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 TOP6BLQ8N6T0 577 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 SETD7Q8WTS6 366 aaKnown RBP14.87□□□□□ -0.03
ACTN1-219ENST00000556432 SAAL1Q96ER3 474 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 RNF38Q9H0F5 515 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 FAM124BQ9H5Z6 455 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-219ENST00000556432 TBC1D14Q9P2M4 693 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 DEC1Q9P2X7 70 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 ITGA11Q9UKX5 1188 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 STYXL1Q9Y6J8 313 aa14.87□□□□□ -0.03
ACTN1-219ENST00000556432 SMG1Q96Q15 3661 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms