RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FRMD1Q8N878 549 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 KIAA1958Q8N8K9 716 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 IL17RCQ8NAC3 791 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ZNF507Q8TCN5 953 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PLEKHO2Q8TD55 490 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 WBP2Q969T9 261 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CNOT6LQ96LI5 555 aaKnown RBP15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 EDEM2Q9BV94 578 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TMEM121BQ9BXQ6 578 aaPredicted RBP15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ZNF518BQ9C0D4 1074 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 AGPAT3Q9NRZ7 376 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 HCN2Q9UL51 889 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CPQQ9Y646 472 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 DMXL2Q8TDJ6 3036 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SGK1O00141 431 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CLDN5O00501 218 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ADAM23O75077 832 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 RHOBTB1O94844 696 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TNNC2P02585 160 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PDCP20941 246 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TXLNAP40222 546 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 KIR2DL1P43626 348 aaPredicted RBP15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CYP27A1Q02318 531 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TAF10Q12962 218 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 DHCR24Q15392 516 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ELF2Q15723 593 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 EMC10Q5UCC4 262 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ANO7Q6IWH7 933 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PSAPL1Q6NUJ1 521 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PAQR9Q6ZVX9 377 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CCDC65Q8IXS2 484 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CCDC33Q8N5R6 958 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 LINC00301Q8NCQ3 95 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TSTD1Q8NFU3 115 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 FNBP1Q96RU3 617 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 B3GNT5Q9BYG0 378 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TNMDQ9H2S6 317 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ZDHHC4Q9NPG8 344 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SMPD4Q9NXE4 827 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TRPM5Q9NZQ8 1165 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 FAM208BQ5VWN6 2430 aa15.31■□□□□ 0.04
CHMP4BP1-201ENST00000556017 EIF3DO15371 548 aaKnown RBP eCLIP15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TOP3BO95985 862 aaKnown RBP15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PTPN1P18031 435 aaKnown RBP15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CASP1P29466 404 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 GNL1P36915 607 aaPredicted RBP15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PGFP49763 221 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CYP24A1Q07973 514 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 NR1H3Q13133 447 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PSMD6Q15008 389 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SURF1Q15526 300 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MAPRE1Q15691 268 aaKnown RBP15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SNRNP35Q16560 246 aaKnown RBP15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ALLCQ8N6M5 410 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 RDH13Q8NBN7 331 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SCFD1Q8WVM8 642 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PCDH15Q96QU1 1955 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MMS19Q96T76 1030 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CGRRF1Q99675 332 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 IL37Q9NZH6 218 aa15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MBD1Q9UIS9 605 aaPredicted RBP15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 RALYQ9UKM9 306 aaKnown RBP15.3■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MYH10P35580 1976 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TNFRSF10BO14763 440 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TRIM66O15016 1216 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 FAM163BP0C2L3 166 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 P2RY2P41231 377 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MYL6P60660 151 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 IRX4P78413 519 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MRPS21P82921 87 aaKnown RBP15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SHC4Q6S5L8 630 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ETFBKMTQ8IXQ9 262 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 RLN3Q8WXF3 142 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 EXOC4Q96A65 974 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ELMO3Q96BJ8 720 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 KCNK16Q96T55 309 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SDCBP2Q9H190 292 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CD248Q9HCU0 757 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TMEM74BQ9NUR3 256 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CFAP97Q9P2B7 532 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 LAMA5O15230 3695 aa15.29■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PKD1L2Q7Z442 2459 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 FAM92AA1XBS5 289 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CLIC2O15247 247 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 COCHO43405 550 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 GREM1O60565 184 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 KAT7O95251 611 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 DLATP10515 647 aaKnown RBP15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 GBP1P32455 592 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 EIF2DP41214 584 aaKnown RBP15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PTGER3P43115 390 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PPP3CCP48454 512 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PDE6CP51160 858 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CDH8P55286 799 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MAP7D1Q3KQU3 841 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 WDR72Q3MJ13 1102 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 USP39Q53GS9 565 aaKnown RBP15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 FAM26FQ5R3K3 315 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms