RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SLITRK1Q96PX8 696 aa21■□□□□ 0.95
PRKCH-219ENST00000555906 SMYD3Q9H7B4 428 aa21■□□□□ 0.95
PRKCH-219ENST00000555906 EXOC1Q9NV70 894 aa21■□□□□ 0.95
PRKCH-219ENST00000555906 SERTAD1Q9UHV2 236 aa21■□□□□ 0.95
PRKCH-219ENST00000555906 RCOR1Q9UKL0 485 aa21■□□□□ 0.95
PRKCH-219ENST00000555906 ATP8B3O60423 1300 aa21■□□□□ 0.95
PRKCH-219ENST00000555906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.99■□□□□ 0.95
PRKCH-219ENST00000555906 LRRIQ3A6PVS8 624 aaPredicted RBP20.99■□□□□ 0.95
PRKCH-219ENST00000555906 SLC30A4O14863 429 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 PHACTR2O75167 634 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 EPN2O95208 641 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 CCDC192P0DO97 292 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 PXNP49023 591 aaPredicted RBP20.99■□□□□ 0.95
PRKCH-219ENST00000555906 TAF10Q12962 218 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 BIRC3Q13489 604 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 SLC9A9Q8IVB4 645 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 PARD3BQ8TEW8 1205 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 HHIPQ96QV1 700 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 B3GNT5Q9BYG0 378 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 CPQQ9Y646 472 aa20.99■□□□□ 0.95
PRKCH-219ENST00000555906 RAP1GAPP47736 663 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 STK4Q13043 487 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 PSMD2Q13200 908 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 NCOA4Q13772 614 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 ZNF667Q5HYK9 610 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 FAM35AQ86V20 835 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 PDZD8Q8NEN9 1154 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 OVCA2Q8WZ82 227 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 LINC00597Q9H2U6 94 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 DMAC2Q9NW81 257 aa20.98■□□□□ 0.95
PRKCH-219ENST00000555906 MYOFQ9NZM1 2061 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.97■□□□□ 0.95
PRKCH-219ENST00000555906 CLDN5O00501 218 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 AXIN1O15169 862 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 RTN3O95197 1032 aaPredicted RBP20.97■□□□□ 0.95
PRKCH-219ENST00000555906 APBB3O95704 486 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 CYP17A1P05093 508 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 MYL1P05976 194 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 OPRD1P41143 372 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 DMC1Q14565 340 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 GAB4Q2WGN9 574 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 FILIP1Q7Z7B0 1213 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 KBTBD6Q86V97 674 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 DDX42Q86XP3 938 aaKnown RBP eCLIP20.97■□□□□ 0.95
PRKCH-219ENST00000555906 NUP93Q8N1F7 819 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 PAGE5Q96GU1 130 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 RNF38Q9H0F5 515 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 KCTD10Q9H3F6 313 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 POLR3BQ9NW08 1133 aaPredicted RBP20.97■□□□□ 0.95
PRKCH-219ENST00000555906 EBF1Q9UH73 591 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 USP25Q9UHP3 1055 aa20.97■□□□□ 0.95
PRKCH-219ENST00000555906 SLC9A3R1O14745 358 aaPredicted RBP20.96■□□□□ 0.95
PRKCH-219ENST00000555906 CLSTN1O94985 981 aa20.96■□□□□ 0.95
PRKCH-219ENST00000555906 C4BPAP04003 597 aaKnown RBP20.96■□□□□ 0.95
PRKCH-219ENST00000555906 PFKFB1P16118 471 aa20.96■□□□□ 0.95
PRKCH-219ENST00000555906 YWHAQP27348 245 aa20.96■□□□□ 0.95
PRKCH-219ENST00000555906 KMT5BQ4FZB7 885 aa20.96■□□□□ 0.95
PRKCH-219ENST00000555906 SCARA5Q6ZMJ2 495 aa20.96■□□□□ 0.95
PRKCH-219ENST00000555906 FBXO32Q969P5 355 aa20.96■□□□□ 0.95
PRKCH-219ENST00000555906 SMARCD1Q96GM5 515 aa20.96■□□□□ 0.95
PRKCH-219ENST00000555906 ZC3H10Q96K80 434 aaKnown RBP20.96■□□□□ 0.95
PRKCH-219ENST00000555906 TNIP3Q96KP6 325 aa20.96■□□□□ 0.95
PRKCH-219ENST00000555906 DMAP1Q9NPF5 467 aaPredicted RBP20.96■□□□□ 0.95
PRKCH-219ENST00000555906 PCDHGA5Q9Y5G8 931 aa20.96■□□□□ 0.95
PRKCH-219ENST00000555906 NUP205Q92621 2012 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 TPRP12270 2363 aaKnown RBP20.95■□□□□ 0.94
PRKCH-219ENST00000555906 DCDC2BA2VCK2 349 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 PDXKO00764 312 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 VNN1O95497 513 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 ABL1P00519 1130 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 P4HA1P13674 534 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 IFRD2Q12894 506 aaPredicted RBP20.95■□□□□ 0.94
PRKCH-219ENST00000555906 ZACNQ401N2 412 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 ARRDC1-AS1Q9H2J1 176 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 SMPD4Q9NXE4 827 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 HPSEQ9Y251 543 aa20.95■□□□□ 0.94
PRKCH-219ENST00000555906 CNOT1A5YKK6 2376 aaKnown RBP20.94■□□□□ 0.94
PRKCH-219ENST00000555906 NR3C1P04150 777 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 MBL2P11226 248 aaPredicted RBP20.94■□□□□ 0.94
PRKCH-219ENST00000555906 CMA1P23946 247 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 EIF2DP41214 584 aaKnown RBP20.94■□□□□ 0.94
PRKCH-219ENST00000555906 TUBP50607 506 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 LIMK1P53667 647 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 SLC5A3P53794 718 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 CDH8P55286 799 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 TMC2Q8TDI7 906 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 USP33Q8TEY7 942 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 TAF4BQ92750 862 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 MED10Q9BTT4 135 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 SDCBP2Q9H190 292 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 KRT82Q9NSB4 513 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 CFAP97Q9P2B7 532 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 LAMA1P25391 3075 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 PLXND1Q9Y4D7 1925 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 ACACBO00763 2458 aa20.94■□□□□ 0.94
PRKCH-219ENST00000555906 A0A1B0GVL5 298 aa20.93■□□□□ 0.94
PRKCH-219ENST00000555906 FAM92AA1XBS5 289 aa20.93■□□□□ 0.94
PRKCH-219ENST00000555906 K7EQS6 105 aa20.93■□□□□ 0.94
PRKCH-219ENST00000555906 TNFRSF10BO14763 440 aa20.93■□□□□ 0.94
PRKCH-219ENST00000555906 GDF9O60383 454 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms