RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	UXT	Q9UBK9	157 aa	Predicted RBP	13.19	□□□□□ -0.3
ABCD4-223	ENST00000555904	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.19	□□□□□ -0.3
ABCD4-223	ENST00000555904		A0A087X0T9	212 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	CCDC195	A0A1B0GUA6	201 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	SOWAHD	A6NJG2	315 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	SLC38A8	A6NNN8	435 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	DDX3X	O00571	662 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	CCL16	O15467	120 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	RTN2	O75298	545 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	RFPL2	O75678	378 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	FBXO21	O94952	628 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	FGF19	O95750	216 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	FAM228B	P0C875	321 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	UNG	P13051	313 aa	Predicted RBP	13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	TKTL1	P51854	596 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	CCDC122	Q5T0U0	273 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	SDHAF4	Q5VUM1	108 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	ACAD10	Q6JQN1	1059 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	ALKBH5	Q6P6C2	394 aa	Known RBP	13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	TMEM184A	Q6ZMB5	413 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	MMS22L	Q6ZRQ5	1243 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	TOGARAM2	Q6ZUX3	1019 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	TXLNB	Q8N3L3	684 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	LEMD2	Q8NC56	503 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	ZMIZ2	Q8NF64	920 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	VN1R2	Q8NFZ6	395 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	SLC30A5	Q8TAD4	765 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	C18orf8	Q96DM3	657 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	PPP1R9B	Q96SB3	815 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	CPXM1	Q96SM3	734 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	PCDHB18P	Q96TA0	734 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	CNGB3	Q9NQW8	809 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	ASAH2	Q9NR71	780 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	TMEM30A	Q9NV96	361 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	ADAM22	Q9P0K1	906 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	NAGPA	Q9UK23	515 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	TRANK1	O15050	2925 aa		13.18	□□□□□ -0.3
ABCD4-223	ENST00000555904	FAM170A	A1A519	330 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904		E5RJQ4	531 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	TULP2	O00295	520 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	LINC01565	O15544	149 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	ARHGAP6	O43182	974 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	NDUFA10	O95299	355 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	ZBED1	O96006	694 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	FTL	P02792	175 aa	Predicted RBP	13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	POU2F2	P09086	479 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	MYBL1	P10243	752 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	MMP8	P22894	467 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	YWHAQ	P27348	245 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	KRT83	P78385	493 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	RBM10	P98175	930 aa	Known RBP	13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	C1QBP	Q07021	282 aa	Known RBP	13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	ADAM15	Q13444	863 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	KCNC3	Q14003	757 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	C10orf76	Q5T2E6	689 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	CYP4A22	Q5TCH4	519 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	CES5A	Q6NT32	575 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	ANKRD54	Q6NXT1	300 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	PHF13	Q86YI8	300 aa	Predicted RBP	13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	ZDHHC17	Q8IUH5	632 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	ARHGAP18	Q8N392	663 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	WDTC1	Q8N5D0	677 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	PDZD8	Q8NEN9	1154 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	CMAS	Q8NFW8	434 aa	Predicted RBP	13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	SMG7	Q92540	1137 aa	Known RBP	13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	FBXO32	Q969P5	355 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	PABPC5	Q96DU9	382 aa	Known RBP	13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	TRMT2B	Q96GJ1	504 aa	Known RBP	13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	VCPIP1	Q96JH7	1222 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	GUCD1	Q96NT3	240 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	C11orf70	Q9BRQ4	267 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	TRIM62	Q9BVG3	475 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	SLC4A5	Q9BY07	1137 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	PRKD2	Q9BZL6	878 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	SPTLC3	Q9NUV7	552 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	MTMR10	Q9NXD2	777 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	CYTH4	Q9UIA0	394 aa		13.17	□□□□□ -0.3
ABCD4-223	ENST00000555904	ANKRD62	A6NC57	917 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	EIF3CL	B5ME19	914 aa	Known RBP	13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	HHLA1	C9JL84	531 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	PIK3R2	O00459	728 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	TNFRSF10B	O14763	440 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	GLP2R	O95838	553 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	PTPN2	P17706	415 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	PPP3CC	P48454	512 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	ITIH3	Q06033	890 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	CCDC85B	Q15834	202 aa	Predicted RBP	13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	ASTE1	Q2TB18	679 aa	Predicted RBP	13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	PTPN20	Q4JDL3	420 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	PABPC1L	Q4VXU2	614 aa	Known RBP	13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	RAB41	Q5JT25	222 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	RARS2	Q5T160	578 aa	Known RBP	13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	TMC5	Q6UXY8	1006 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	PDZD4	Q76G19	769 aa	Predicted RBP	13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	MON1B	Q7L1V2	547 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	GPRIN1	Q7Z2K8	1008 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	TMEM110	Q86TL2	294 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	SCUBE3	Q8IX30	993 aa		13.16	□□□□□ -0.3
ABCD4-223	ENST00000555904	STKLD1	Q8NE28	680 aa		13.16	□□□□□ -0.3

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