RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TMEM191BP0C7N4 346 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 THBS3P49746 956 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 WNT3P56703 355 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 SEC23BQ15437 767 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 KHDC1LQ5JSQ8 128 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 GAS2L3Q86XJ1 694 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 SLC15A3Q8IY34 581 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 MVB12AQ96EY5 273 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 HOMER2Q9NSB8 354 aa4.57□□□□□ -1.68
SNX6-204ENST00000555541 CCNL1Q9UK58 526 aaPredicted RBP4.57□□□□□ -1.68
SNX6-204ENST00000555541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
SNX6-204ENST00000555541 FAM90A10PA6NDY2 464 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 BTBD19C9JJ37 291 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 DSCR3O14972 297 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 ALPLP05186 524 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 CYP2C9P11712 490 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 ATF7P17544 494 aaPredicted RBP4.56□□□□□ -1.68
SNX6-204ENST00000555541 ARFIP2P53365 341 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 BRDTQ58F21 947 aaPredicted RBP4.56□□□□□ -1.68
SNX6-204ENST00000555541 SERPINA13PQ6UXR4 307 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 DEF8Q6ZN54 512 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 SFTPA1Q8IWL2 248 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 LINC01465Q8N7H1 131 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 ZCRB1Q8TBF4 217 aaKnown RBP4.56□□□□□ -1.68
SNX6-204ENST00000555541 MAP4K1Q92918 833 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 MMS19Q96T76 1030 aa4.56□□□□□ -1.68
SNX6-204ENST00000555541 A0A087WWL8 130 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 CD8B2A6NJW9 211 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 TLR2O60603 784 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 PMPCBO75439 489 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 MT-CO3P00414 261 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 THP07101 528 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 AKAP5P24588 427 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 ZNF268Q14587 947 aaPredicted RBP4.55□□□□□ -1.68
SNX6-204ENST00000555541 PTCHD3Q3KNS1 767 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 AWAT1Q58HT5 328 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 ATAT1Q5SQI0 421 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 C9orf47Q6ZRZ4 202 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 USP43Q70EL4 1123 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 HPS3Q969F9 1004 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 CHMP4CQ96CF2 233 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 CDK5RAP3Q96JB5 506 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 P2RX7Q99572 595 aaKnown RBP4.55□□□□□ -1.68
SNX6-204ENST00000555541 CGRRF1Q99675 332 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 BRINP2Q9C0B6 783 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 AMFRQ9UKV5 643 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 TMX2Q9Y320 296 aa4.55□□□□□ -1.68
SNX6-204ENST00000555541 CNOT3O75175 753 aaKnown RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 TOMM40O96008 361 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 APEHP13798 732 aaKnown RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 GKP32189 559 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 KCNJ5P48544 419 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 GHRHRQ02643 423 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 CFHR1Q03591 330 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 ZBTB46Q86UZ6 589 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 LIX1LQ8IVB5 337 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 WIPF2Q8TF74 440 aaPredicted RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 HSPBAP1Q96EW2 488 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 PUS7Q96PZ0 661 aaKnown RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 FYTTD1Q96QD9 318 aaKnown RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 C17orf80Q9BSJ5 609 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 DPCDQ9BVM2 203 aaPredicted RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 FOXP1Q9H334 677 aaPredicted RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 TCF7L1Q9HCS4 588 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 SARS2Q9NP81 518 aaKnown RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 TMEM184CQ9NVA4 438 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 GAR1Q9NY12 217 aaKnown RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 HEY2Q9UBP5 337 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 LPAR3Q9UBY5 353 aa4.54□□□□□ -1.68
SNX6-204ENST00000555541 LUC7L2Q9Y383 392 aaKnown RBP4.54□□□□□ -1.68
SNX6-204ENST00000555541 ZMYM2Q9UBW7 1377 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 A0A088AWK7 358 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 TMEM232C9JQI7 657 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 OAZ2O95190 189 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 IL33O95760 270 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 LMAN2Q12907 356 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 PTPROQ16827 1216 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 SIRT6Q8N6T7 355 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 DNAJC5GQ8N7S2 189 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 TMEM171Q8WVE6 324 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 CCDC17Q96LX7 622 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 DPH1Q9BZG8 443 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 ARMT1Q9H993 441 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 TFCP2L1Q9NZI6 479 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 STXBP5LQ9Y2K9 1186 aa4.53□□□□□ -1.68
SNX6-204ENST00000555541 FGF2P09038 288 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 NEK2P51955 445 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 CTBP1Q13363 440 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 KRTAP27-1Q3LI81 207 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 SLC15A4Q8N697 577 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 ZBTB8BQ8NAP8 495 aaPredicted RBP4.52□□□□□ -1.69
SNX6-204ENST00000555541 ZNF548Q8NEK5 533 aaPredicted RBP4.52□□□□□ -1.69
SNX6-204ENST00000555541 OSR1Q8TAX0 266 aaPredicted RBP4.52□□□□□ -1.69
SNX6-204ENST00000555541 BPIFB1Q8TDL5 484 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 PPP2R3CQ969Q6 453 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 GPATCH3Q96I76 525 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 KAZALD1Q96I82 304 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 NUP88Q99567 741 aaPredicted RBP4.52□□□□□ -1.69
SNX6-204ENST00000555541 TRIM54Q9BYV2 358 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 SLC12A5Q9H2X9 1139 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms