RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 C12orf56Q8IXR9 622 aa13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 XXYLT1Q8NBI6 393 aa13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 OR6B3Q8NGW1 331 aa13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 CCDC127Q96BQ5 260 aa13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 ZNF518BQ9C0D4 1074 aa13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 SMOC1Q9H4F8 434 aa13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 SLC39A2Q9NP94 309 aa13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 EBF1Q9UH73 591 aa13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 PCDHA7Q9UN72 937 aa13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 R3HCC1Q9Y3T6 440 aaKnown RBP13.03□□□□□ -0.32
MTHFD1-207ENST00000554677 KLRC4O43908 158 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 FOXD2O60548 495 aaPredicted RBP13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 CCDC192P0DO97 292 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 CASP4P49662 377 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 TAF10Q12962 218 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 NR1H3Q13133 447 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 CUL4BQ13620 913 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 FOXD4L5Q5VV16 416 aaPredicted RBP13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 HS2ST1Q7LGA3 356 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 SFTPA1Q8IWL2 248 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 KIAA1958Q8N8K9 716 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 USP33Q8TEY7 942 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 FOXD4L4Q8WXT5 416 aaPredicted RBP13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 SNX21Q969T3 373 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 ELMO3Q96BJ8 720 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 FNBP1Q96RU3 617 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 SNX25Q9H3E2 840 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 PCDHGA5Q9Y5G8 931 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 UBE4BO95155 1302 aa13.02□□□□□ -0.33
MTHFD1-207ENST00000554677 PLXND1Q9Y4D7 1925 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 PVALEFA0A1B0GWK0 134 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 NFATC1O95644 943 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 APBB3O95704 486 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 C4BPAP04003 597 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 CYP17A1P05093 508 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 HNRNPLP14866 589 aaKnown RBP eCLIP13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 ANXA13P27216 316 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 SLC6A11P48066 632 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 PPP3CCP48454 512 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 PDE6CP51160 858 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 CDH8P55286 799 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 CLDN10P78369 228 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 PSMD2Q13200 908 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 DHCR24Q15392 516 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 KNOP1Q1ED39 458 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 FOXD4L6Q3SYB3 417 aaPredicted RBP13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 TDRD10Q5VZ19 366 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 RESP18Q5W5W9 173 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 RHBDF2Q6PJF5 856 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 FOXD4L3Q6VB84 417 aaPredicted RBP13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 FILIP1Q7Z7B0 1213 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 GRAMD1CQ8IYS0 662 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 B3GALNT2Q8NCR0 500 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 EXOC4Q96A65 974 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 KCNK16Q96T55 309 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 SMYD3Q9H7B4 428 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 VRTNQ9H8Y1 702 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 MAGEF1Q9HAY2 307 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 DMAC2Q9NW81 257 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 IL37Q9NZH6 218 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 NXF1Q9UBU9 619 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 CPQQ9Y646 472 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 TNRC6BQ9UPQ9 1833 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 USP24Q9UPU5 2620 aa13.01□□□□□ -0.33
MTHFD1-207ENST00000554677 FRYQ5TBA9 3013 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 A0A0A0MRY4 1105 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 A8MXQ7 604 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 TNFRSF10BO14763 440 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 SCAMP3O14828 347 aaKnown RBP13□□□□□ -0.33
MTHFD1-207ENST00000554677 VNN1O95497 513 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 ZSCAN22P10073 491 aaPredicted RBP13□□□□□ -0.33
MTHFD1-207ENST00000554677 ATICP31939 592 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 MPLP40238 635 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 AFMP43652 599 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 TNNC1P63316 161 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 AASDHQ4L235 1098 aaPredicted RBP13□□□□□ -0.33
MTHFD1-207ENST00000554677 C2orf27AQ580R0 203 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 STPG1Q5TH74 334 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 RASSF3Q86WH2 238 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 C12orf40Q86WS4 652 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 NUP93Q8N1F7 819 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 SCAMP5Q8TAC9 235 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 PARD3BQ8TEW8 1205 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 ACDQ96AP0 544 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 ZFRQ96KR1 1074 aaKnown RBP13□□□□□ -0.33
MTHFD1-207ENST00000554677 SDCBP2Q9H190 292 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 SMPD4Q9NXE4 827 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 CGNQ9P2M7 1197 aaKnown RBP13□□□□□ -0.33
MTHFD1-207ENST00000554677 CHORDC1Q9UHD1 332 aaPredicted RBP13□□□□□ -0.33
MTHFD1-207ENST00000554677 INVSQ9Y283 1065 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 CFAP47Q6ZTR5 3102 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 CACNA1EQ15878 2313 aa13□□□□□ -0.33
MTHFD1-207ENST00000554677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 BCLAF3A2AJT9 711 aaKnown RBP12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 LRRIQ3A6PVS8 624 aaPredicted RBP12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 F13A1P00488 732 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 ABL1P00519 1130 aa12.99□□□□□ -0.33
MTHFD1-207ENST00000554677 YWHAQP27348 245 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms