RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 XRCC6P12956 609 aaKnown RBP eCLIP18.14■□□□□ 0.49
NEK9-204ENST00000554258 GABRG2P18507 467 aa18.14■□□□□ 0.49
NEK9-204ENST00000554258 MUTP22033 750 aa18.14■□□□□ 0.49
NEK9-204ENST00000554258 MAOBP27338 520 aa18.14■□□□□ 0.49
NEK9-204ENST00000554258 LY6DQ14210 128 aa18.14■□□□□ 0.49
NEK9-204ENST00000554258 ZNF419Q96HQ0 510 aaPredicted RBP18.14■□□□□ 0.49
NEK9-204ENST00000554258 CLIC6Q96NY7 704 aa18.14■□□□□ 0.49
NEK9-204ENST00000554258 TMEM206Q9H813 350 aa18.14■□□□□ 0.49
NEK9-204ENST00000554258 MAGED2Q9UNF1 606 aaPredicted RBP18.14■□□□□ 0.49
NEK9-204ENST00000554258 PCDHGB2Q9Y5G2 931 aa18.14■□□□□ 0.49
NEK9-204ENST00000554258 ANAPC1Q9H1A4 1944 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 DOPEY1Q5JWR5 2465 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 A0A1B0GTW7 788 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 ZNF217O75362 1048 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 KAT7O95251 611 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 CHRM1P11229 460 aaPredicted RBP18.13■□□□□ 0.49
NEK9-204ENST00000554258 HMGA1P17096 107 aaKnown RBP18.13■□□□□ 0.49
NEK9-204ENST00000554258 TYMPP19971 482 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 RPA1P27694 616 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 KIR2DL1P43626 348 aaPredicted RBP18.13■□□□□ 0.49
NEK9-204ENST00000554258 AARSP49588 968 aaKnown RBP eCLIP18.13■□□□□ 0.49
NEK9-204ENST00000554258 CCDC173Q0VFZ6 552 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 GAB4Q2WGN9 574 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 HYIQ5T013 277 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 ADALQ6DHV7 355 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 PRICKLE2Q7Z3G6 844 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 TMEM130Q8N3G9 435 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 SPATA18Q8TC71 538 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 FOXJ1Q92949 421 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 CYP2S1Q96SQ9 504 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 PNKPQ96T60 521 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 CCSER1Q9C0I3 900 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 TUFT1Q9NNX1 390 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 IL17BQ9UHF5 180 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.13■□□□□ 0.49
NEK9-204ENST00000554258 BTBD3Q9Y2F9 522 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 TCHHQ07283 1943 aa18.13■□□□□ 0.49
NEK9-204ENST00000554258 BOD1L1Q8NFC6 3051 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 TRAV19A0A0A6YYK7 116 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 PP2D1A8MPX8 630 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 ZBTB24O43167 697 aaPredicted RBP18.12■□□□□ 0.49
NEK9-204ENST00000554258 JUPP14923 745 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 HNF1BP35680 557 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 ME1P48163 572 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 MESP2Q0VG99 397 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 MYO1EQ12965 1108 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 PTPRNQ16849 979 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 IL27RAQ6UWB1 636 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 DBX2Q6ZNG2 339 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 CATSPER3Q86XQ3 398 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 KCTD17Q8N5Z5 321 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 OR10T2Q8NGX3 314 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 SH3RF2Q8TEC5 729 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 FGF11Q92914 225 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 SLC22A12Q96S37 553 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 GDPD2Q9HCC8 539 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 ABCA12Q86UK0 2595 aa18.12■□□□□ 0.49
NEK9-204ENST00000554258 FAM237AA0A1B0GTK4 181 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 A0A1W2PQ27 194 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 A0A1W2PQ64 194 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 K7ERI5 159 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 MED24O75448 989 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 CDC25AP30304 524 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 SLC6A11P48066 632 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 SUZ12Q15022 739 aaKnown RBP18.11■□□□□ 0.49
NEK9-204ENST00000554258 HLA-BQ31612 363 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 KRT79Q5XKE5 535 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 SHC4Q6S5L8 630 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 USP49Q70CQ1 688 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 SPACA3Q8IXA5 215 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 ZCCHC9Q8N567 271 aaKnown RBP18.11■□□□□ 0.49
NEK9-204ENST00000554258 ENGASEQ8NFI3 743 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 ERMNQ8TAM6 284 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 EPSTI1Q96J88 318 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 IFT74Q96LB3 600 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 ACO2Q99798 780 aaKnown RBP18.11■□□□□ 0.49
NEK9-204ENST00000554258 TCHPQ9BT92 498 aa18.11■□□□□ 0.49
NEK9-204ENST00000554258 TMEM131Q92545 1883 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 MEI4A8MW99 385 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 MCF2P10911 925 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 HAPLN1P10915 354 aaPredicted RBP18.1■□□□□ 0.49
NEK9-204ENST00000554258 ODC1P11926 461 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 HARSP12081 509 aaKnown RBP18.1■□□□□ 0.49
NEK9-204ENST00000554258 CMA1P23946 247 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 LRPAP1P30533 357 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 KDSRQ06136 332 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 KCNH2Q12809 1159 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 ECM1Q16610 540 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 RESP18Q5W5W9 173 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 HAUS3Q68CZ6 603 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 STKLD1Q8NE28 680 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 SPPL2BQ8TCT7 592 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 C2orf15Q8WU43 125 aaKnown RBP18.1■□□□□ 0.49
NEK9-204ENST00000554258 TRIM4Q9C037 500 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 MIR1-1HGQ9H1L0 117 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 PTPRHQ9HD43 1115 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 ARHGEF4Q9NR80 690 aa18.1■□□□□ 0.49
NEK9-204ENST00000554258 ABI2Q9NYB9 513 aaPredicted RBP18.1■□□□□ 0.49
NEK9-204ENST00000554258 CYP17A1P05093 508 aa18.09■□□□□ 0.49
NEK9-204ENST00000554258 CCT6AP40227 531 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms