RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 CCL26Q9Y258 94 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 CLUHO75153 1309 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 COL11A1P12107 1806 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 FREM2Q5SZK8 3169 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 PLXNA1Q9UIW2 1896 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 RTTNQ86VV8 2226 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 SHISA7A6NL88 538 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 H0Y626 953 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 KPNA3O00505 521 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 SLC31A1O15431 190 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 EDIL3O43854 480 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 GDF9O60383 454 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF623O75123 536 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 PRAMEF12O95522 483 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 ATICP31939 592 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 PSMC2P35998 433 aaKnown RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 NNMTP40261 264 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 GRM5P41594 1212 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 RECQLP46063 649 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 NOP2P46087 812 aaKnown RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 NOP14P78316 857 aaKnown RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 IL9RQ01113 521 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 AMPD2Q01433 879 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 PFKPQ01813 784 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 SPIRE1Q08AE8 756 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 SIGLEC14Q08ET2 396 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 DMWDQ09019 674 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 CDH18Q13634 790 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 SF3A2Q15428 464 aaKnown RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 ELF2Q15723 593 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 FNDC3BQ53EP0 1204 aaKnown RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 DCAF6Q58WW2 860 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 LRRC73Q5JTD7 316 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 LY6G5CQ5SRR4 150 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 C10orf76Q5T2E6 689 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 ARL6IP4Q66PJ3 421 aaKnown RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 GJB7Q6PEY0 223 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 DCUN1D2Q6PH85 259 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 ZC3H14Q6PJT7 736 aaKnown RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 CRTC1Q6UUV9 634 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 MOXD1Q6UVY6 613 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 FILIP1Q7Z7B0 1213 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 GPR149Q86SP6 731 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 LRRTM3Q86VH5 581 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 CHSY1Q86X52 802 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 DNAAF5Q86Y56 855 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 SCUBE3Q8IX30 993 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 NPAS3Q8IXF0 933 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 CMTM8Q8IZV2 173 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 C1orf127Q8N9H9 656 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 OR10T2Q8NGX3 314 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 OR6K2Q8NGY2 324 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 GRIN3AQ8TCU5 1115 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 CYB5D2Q8WUJ1 264 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 TATDN2Q93075 761 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 VWCEQ96DN2 955 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 POM121Q96HA1 1249 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 NT5C1BQ96P26 610 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 AGXT2Q9BYV1 514 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 ZBP1Q9H171 429 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 CCSER2Q9H7U1 834 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 AGPAT3Q9NRZ7 376 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 DZANK1Q9NVP4 752 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 MARCH5Q9NX47 278 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 GMIPQ9P107 970 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 CEP72Q9P209 647 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 KLHL42Q9P2K6 505 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 TJP2Q9UDY2 1190 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 IPO11Q9UI26 975 aaKnown RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 FBXO2Q9UK22 296 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 DOCK5Q9H7D0 1870 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 MDC1Q14676 2089 aaKnown RBP2.65□□□□□ -1.99
PRPF39-205ENST00000554081 PTPRJQ12913 1337 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 PHLPP2Q6ZVD8 1323 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 PLXNB2O15031 1838 aa2.65□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3DA0A087WVF3 549 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3IA0A087WXS9 549 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3EA0A087X179 549 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3KA0A087X1G2 549 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 IGKV6D-21A0A0A0MT36 114 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TLDC2A0PJX2 215 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 MTMR11A4FU01 709 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3FA6NER0 549 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3LB9A6J9 549 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ACTN4O43707 911 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 UQCRHP07919 91 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3HP0C7X1 549 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CSH1P0DML2 217 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CSH2P0DML3 217 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 MAPTP10636 758 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 RALAP11233 206 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 KRT10P13645 584 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CAPN2P17655 700 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PTPN1P18031 435 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PAX3P23760 479 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CCR2P41597 374 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PRCPP42785 496 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 HARS2P49590 506 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms