RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 TWF1Q12792 350 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 PPP2R5CQ13362 524 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 ORC1Q13415 861 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 CAPSQ13938 189 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 KARSQ15046 597 aaKnown RBP7.53□□□□□ -1.2
ATXN3-224ENST00000554040 POU4F3Q15319 338 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 XKR9Q5GH70 373 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 TMEM196Q5HYL7 178 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 TTC22Q5TAA0 569 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 CREB3L3Q68CJ9 461 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 TPGS2Q68CL5 300 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 SEZ6L2Q6UXD5 910 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 HAUS6Q7Z4H7 955 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 ARID3BQ8IVW6 561 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-224ENST00000554040 ZFYVE19Q96K21 471 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 FAM129BQ96TA1 746 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 SEMA6CQ9H3T2 930 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 SLITRK6Q9H5Y7 841 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 ACSS3Q9H6R3 686 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 XPNPEP1Q9NQW7 623 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 POLR3BQ9NW08 1133 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-224ENST00000554040 CACNA2D2Q9NY47 1150 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 MAFFQ9ULX9 164 aa7.53□□□□□ -1.2
ATXN3-224ENST00000554040 CCDC196A0A1B0GTZ2 297 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 SPAARA0A1B0GVQ0 90 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 H7C4K7 107 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 TRDMT1O14717 391 aaKnown RBP7.52□□□□□ -1.21
ATXN3-224ENST00000554040 RECQL4O94761 1208 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 NFICP08651 508 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 GLRA2P23416 452 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 RDXP35241 583 aaKnown RBP7.52□□□□□ -1.21
ATXN3-224ENST00000554040 TXKP42681 527 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 BRCC3P46736 316 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 CLCNKBP51801 687 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 SIM1P81133 766 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-224ENST00000554040 TNK2Q07912 1038 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 SCAPQ12770 1279 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 GRSF1Q12849 480 aaKnown RBP eCLIP7.52□□□□□ -1.21
ATXN3-224ENST00000554040 MRPL58Q14197 206 aaKnown RBP7.52□□□□□ -1.21
ATXN3-224ENST00000554040 NECTIN1Q15223 517 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 EPHA7Q15375 998 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 UPP1Q16831 310 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 MOXD1Q6UVY6 613 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 CBLL1Q75N03 491 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 PIP4P1Q86T03 277 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 CHCHD4Q8N4Q1 142 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 CCDC148Q8NFR7 591 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 UROC1Q96N76 676 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 TBC1D32Q96NH3 1257 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 LRRC3Q9BY71 257 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 C22orf23Q9BZE7 217 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 LSG1Q9H089 658 aaKnown RBP7.52□□□□□ -1.21
ATXN3-224ENST00000554040 OBP2AQ9NY56 170 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 EBF1Q9UH73 591 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 AFF4Q9UHB7 1163 aaKnown RBP7.52□□□□□ -1.21
ATXN3-224ENST00000554040 VAV3Q9UKW4 847 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 ADAMTS20P59510 1910 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 WDR81Q562E7 1941 aa7.52□□□□□ -1.21
ATXN3-224ENST00000554040 KLF18A0A0U1RQI7 1052 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 UPK3BL1B0FP48 263 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 PATE3B3GLJ2 98 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 UPK3BL2E5RIL1 263 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 I3L4J1 428 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 SYN3O14994 580 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 TBX3O15119 743 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-224ENST00000554040 CYP11A1P05108 521 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 GBP1P32455 592 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 LMAN2Q12907 356 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 PTPAQ15257 358 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 FAM187BQ17R55 369 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 ITPRIPL2Q3MIP1 535 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 PMS2CLQ68D20 193 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 FSTL4Q6MZW2 842 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 C11orf74Q86VG3 221 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 HNRNPLLQ8WVV9 542 aaKnown RBP7.51□□□□□ -1.21
ATXN3-224ENST00000554040 FAM20AQ96MK3 541 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 TCEANC2Q96MN5 208 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 PPP1R10Q96QC0 940 aaKnown RBP7.51□□□□□ -1.21
ATXN3-224ENST00000554040 LXNQ9BS40 222 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 SLKQ9H2G2 1235 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-224ENST00000554040 FZD8Q9H461 694 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 ZSWIM4Q9H7M6 989 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 NPHS2Q9NP85 383 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 PRMT7Q9NVM4 692 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-224ENST00000554040 RGL1Q9NZL6 768 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 VPS54Q9P1Q0 977 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 DDX25Q9UHL0 483 aaKnown RBP7.51□□□□□ -1.21
ATXN3-224ENST00000554040 EVLQ9UI08 416 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-224ENST00000554040 FBXL5Q9UKA1 691 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 TPCN1Q9ULQ1 816 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 RNF114Q9Y508 228 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 UNC79Q9P2D8 2635 aa7.51□□□□□ -1.21
ATXN3-224ENST00000554040 TDRD15B5MCY1 1934 aaKnown RBP7.5□□□□□ -1.21
ATXN3-224ENST00000554040 ATG2BQ96BY7 2078 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 COL4A2P08572 1712 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms