RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GORABQ5T7V8 394 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 CCDC181Q5TID7 509 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 LAYNQ6UX15 382 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 PIM3Q86V86 326 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.97□□□□□ -1.935e-7■■□□□ 13.5
SRP54-204ENST00000553923 B4GALNT2Q8NHY0 566 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 OSR1Q8TAX0 266 aaPredicted RBP2.97□□□□□ -1.93
SRP54-204ENST00000553923 WIPF2Q8TF74 440 aaPredicted RBP2.97□□□□□ -1.93
SRP54-204ENST00000553923 FYTTD1Q96QD9 318 aaKnown RBP2.97□□□□□ -1.93
SRP54-204ENST00000553923 PRR25Q96S07 402 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 MMS19Q96T76 1030 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 SLCO5A1Q9H2Y9 848 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 MYH16Q9H6N6 1097 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 PCDH12Q9NPG4 1184 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 ABCF2Q9UG63 623 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 CCNL1Q9UK58 526 aaPredicted RBP2.97□□□□□ -1.93
SRP54-204ENST00000553923 ICKQ9UPZ9 632 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 MRPS17Q9Y2R5 130 aaKnown RBP2.97□□□□□ -1.93
SRP54-204ENST00000553923 PRKAB1Q9Y478 270 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 RIPOR2Q9Y4F9 1068 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 PLEKHD1A6NEE1 506 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 AP4M1O00189 453 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 SLC16A6O15403 523 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 SLC28A2O43868 658 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 MT-CO3P00414 261 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 TYRP14679 529 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 ATF7P17544 494 aaPredicted RBP2.96□□□□□ -1.94
SRP54-204ENST00000553923 HDCP19113 662 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 ADORA2AP29274 412 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 CDKN2AP42771 156 aaKnown RBP2.96□□□□□ -1.94
SRP54-204ENST00000553923 PDE6CP51160 858 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 ID2Q02363 134 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 MYO1EQ12965 1108 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 FHL3Q13643 280 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 LY6KQ17RY6 165 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 AWAT1Q58HT5 328 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 EMC10Q5UCC4 262 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 ZNF549Q6P9A3 640 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 HEATR3Q7Z4Q2 680 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 SFTPA1Q8IWL2 248 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 EXOC8Q8IYI6 725 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 ABRAQ8N0Z2 381 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 PRR18Q8N4B5 295 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 CPA6Q8N4T0 437 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 PRPF38AQ8NAV1 312 aaKnown RBP2.96□□□□□ -1.94
SRP54-204ENST00000553923 RSPRY1Q96DX4 576 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 THOC3Q96J01 351 aaKnown RBP2.96□□□□□ -1.94
SRP54-204ENST00000553923 CCDC17Q96LX7 622 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 MLXIPQ9HAP2 919 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 SPC25Q9HBM1 224 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 SLC5A4Q9NY91 659 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 CHPF2Q9P2E5 772 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 MCM8Q9UJA3 840 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.96□□□□□ -1.94
SRP54-204ENST00000553923 HS3ST3B1Q9Y662 390 aa2.96□□□□□ -1.94
SRP54-204ENST00000553923 LOC102724159A0A0B4J2E5 919 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 ZRANB2O95218 330 aaKnown RBP eCLIP2.95□□□□□ -1.94
SRP54-204ENST00000553923 MAP4K4O95819 1239 aaPredicted RBP2.95□□□□□ -1.94
SRP54-204ENST00000553923 VIPR2P41587 438 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 EXOSC9Q06265 439 aaKnown RBP2.95□□□□□ -1.94
SRP54-204ENST00000553923 ODF1Q14990 250 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 PWP2Q15269 919 aaKnown RBP2.95□□□□□ -1.94
SRP54-204ENST00000553923 UAP1L1Q3KQV9 507 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 ZIK1Q3SY52 487 aaPredicted RBP2.95□□□□□ -1.94
SRP54-204ENST00000553923 ZNF585BQ52M93 769 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 TMTC4Q5T4D3 741 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 DEPDC1Q5TB30 811 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 LVRNQ6Q4G3 990 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 DPY19L3Q6ZPD9 716 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 COLCA1Q6ZS62 124 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 CAND1Q86VP6 1230 aaKnown RBP2.95□□□□□ -1.94
SRP54-204ENST00000553923 ZNF280BQ86YH2 543 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 LINC01465Q8N7H1 131 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 OSCP1Q8WVF1 389 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 JDP2Q8WYK2 163 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 CTHRC1Q96CG8 243 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 CCDC136Q96JN2 1154 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 CXorf36Q9H7Y0 433 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 SLC52A1Q9NWF4 448 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 GAR1Q9NY12 217 aaKnown RBP2.95□□□□□ -1.94
SRP54-204ENST00000553923 TFCP2L1Q9NZI6 479 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 PI4KBQ9UBF8 816 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 GABBR1Q9UBS5 961 aa2.95□□□□□ -1.94
SRP54-204ENST00000553923 XPOTO43592 962 aaKnown RBP2.94□□□□□ -1.94
SRP54-204ENST00000553923 TULP3O75386 442 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 GCATO75600 419 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 UNC5CO95185 931 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 VNN1O95497 513 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 APEHP13798 732 aaKnown RBP2.94□□□□□ -1.94
SRP54-204ENST00000553923 NKX6-1P78426 367 aaPredicted RBP2.94□□□□□ -1.94
SRP54-204ENST00000553923 MTX1Q13505 466 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 PLEKHG6Q3KR16 790 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 AMOTQ4VCS5 1084 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 DGKKQ5KSL6 1271 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 UBE2Q1Q7Z7E8 422 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 FMNL3Q8IVF7 1028 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 IZUMO1Q8IYV9 350 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 MORC4Q8TE76 937 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 MESP1Q9BRJ9 268 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms