RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 ANGPTL3Q9Y5C1 460 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 ATXN2Q99700 1313 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 A0A0G2JLW4 131 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 A0A1W2PQC6 194 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CCDC160A6NGH7 325 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CCDC169A6NNP5 214 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 M0R082 166 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 IGF2BP3O00425 579 aaKnown RBP eCLIP4.22□□□□□ -1.73
RDH11-204ENST00000553578 PSMD14O00487 310 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 MUSKO15146 869 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ATP2A2P16615 1042 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 GRK2P25098 689 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ATP5DP30049 168 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 POLD2P49005 469 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CCR3P51677 355 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 NRLP54845 237 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 KRT85P78386 507 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ELF3P78545 371 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 DR1Q01658 176 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 PPARAQ07869 468 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 KCTD21Q4G0X4 260 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 FOXB2Q5VYV0 432 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 RESP18Q5W5W9 173 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 PSAPL1Q6NUJ1 521 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CFAP161Q6P656 301 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 DGLUCYQ7Z3D6 616 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 YTHDF3Q7Z739 585 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 SULF2Q8IWU5 870 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 C4orf32Q8N8J7 132 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 BBOF1Q8ND07 529 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ZNF417Q8TAU3 575 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 AGAP11Q8TF27 550 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CRYGNQ8WXF5 182 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 WASF1Q92558 559 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 SGCDQ92629 289 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 MBOAT7Q96N66 472 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ACAP3Q96P50 834 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 SMC6Q96SB8 1091 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ZNF587Q96SQ5 575 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 PNKPQ96T60 521 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 FAM129BQ96TA1 746 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 SORBS1Q9BX66 1292 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 PNPLA8Q9NP80 782 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 DCP1AQ9NPI6 582 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 ANLNQ9NQW6 1124 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 AKT3Q9Y243 479 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 STK38LQ9Y2H1 464 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 RBMX2Q9Y388 322 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 PTPDC1A2A3K4 754 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 H0YC42 278 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 GABRDO14764 452 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 GNB5O14775 395 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 KCNJ13O60928 360 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 MMP1P03956 469 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CD3EP07766 207 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 NPR1P16066 1061 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 SLC9A1P19634 815 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 RECQLP46063 649 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 CD97P48960 835 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 SF3A3Q12874 501 aaKnown RBP eCLIP4.22□□□□□ -1.739e-8■■■□□ 19.2
RDH11-204ENST00000553578 HYAL2Q12891 473 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 KIF22Q14807 665 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 NR1D2Q14995 579 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ANKDD1AQ495B1 522 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 BOLA3Q53S33 107 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 HABP4Q5JVS0 413 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 PDE12Q6L8Q7 609 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 C1orf229Q6ZS94 237 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 ENOSF1Q7L5Y1 443 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 RASGRP2Q7LDG7 609 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 PTRH1Q86Y79 214 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 RHOT1Q8IXI2 618 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 LCORLQ8N3X6 602 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CCDC148Q8NFR7 591 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 DACT3Q96B18 629 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 RRP36Q96EU6 259 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 TRAPPC9Q96Q05 1148 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 MRPL9Q9BYD2 267 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 ABCG4Q9H172 646 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 DDX25Q9UHL0 483 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 HCN2Q9UL51 889 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CRYL1Q9Y2S2 319 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 PCDHA11Q9Y5I1 949 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 MYH7BA7E2Y1 1941 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 TNKSO95271 1327 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 SSC5DA1L4H1 1573 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 LCHNA4D1U4 455 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 MCF2LO15068 1137 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ZW10O43264 779 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CYTH3O43739 400 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 MMP20O60882 483 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 SHOX2O60902 331 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 STAMBPO95630 424 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 EGFRP00533 1210 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 LTFP02788 710 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 TUBBP07437 444 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 UBL4AP11441 157 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ETS2P15036 469 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 PRLRP16471 622 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms