RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 PLEKHA8P1O95397 391 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 SCGB1D2O95969 90 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 SNHG28P0DPA3 235 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ENPP1P22413 925 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 LIFRP42702 1097 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 NOVP48745 357 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 METAP2P50579 478 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATXN3-222ENST00000553570 KRT85P78386 507 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 TROAPQ12815 778 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 TRAF1Q13077 416 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ACVR2BQ13705 512 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ODF1Q14990 250 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 CT83Q5H943 113 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 PITRM1Q5JRX3 1037 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 PRAMEF9Q5VWM5 478 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 SLFN12LQ6IEE8 588 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 TIGD7Q6NT04 549 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-222ENST00000553570 BORAQ6PGQ7 559 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 SEPT14Q6ZU15 432 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 ARMCX2Q7L311 632 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 KANSL1Q7Z3B3 1105 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 HEATR3Q7Z4Q2 680 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 FAM124AQ86V42 546 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 SRBD1Q8N5C6 995 aaKnown RBP5.33□□□□□ -1.56
ATXN3-222ENST00000553570 TRPV1Q8NER1 839 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 E2F7Q96AV8 911 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 AJUBAQ96IF1 538 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 PAWRQ96IZ0 340 aaKnown RBP5.33□□□□□ -1.56
ATXN3-222ENST00000553570 TAAR1Q96RJ0 339 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 LZTS2Q9BRK4 669 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 SENP6Q9GZR1 1112 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-222ENST00000553570 KATNBL1Q9H079 304 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 CDH19Q9H159 772 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 UPF2Q9HAU5 1272 aaKnown RBP5.33□□□□□ -1.56
ATXN3-222ENST00000553570 MKS1Q9NXB0 559 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 GALNT8Q9NY28 637 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 CYP39A1Q9NYL5 469 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 FTSJ1Q9UET6 329 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 KCNG1Q9UIX4 513 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 PNMA2Q9UL42 364 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 TMPRSS11EQ9UL52 423 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 FAM184BQ9ULE4 1060 aa5.33□□□□□ -1.56
ATXN3-222ENST00000553570 CCDC196A0A1B0GTZ2 297 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 E2F8A0AVK6 867 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 KBTBD13C9JR72 458 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 GCOM1H8Y6P7 765 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 K7ESM1 405 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 SNAI1O95863 264 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 PGK1P00558 417 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 HOXC6P09630 235 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 POLR2MP0CAP2 368 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 RARBP10826 455 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 CCND1P24385 295 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 ALDH5A1P51649 535 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 NAPAP54920 295 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 RPS6P62753 249 aaKnown RBP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 SRSF2Q01130 221 aaKnown RBP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 TNFAIP2Q03169 654 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 ROM1Q03395 351 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 ADCY2Q08462 1091 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 NOLC1Q14978 699 aaKnown RBP eCLIP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 KIAA1841Q6NSI8 718 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 CCDC62Q6P9F0 684 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 APOA5Q6Q788 366 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 SLC30A10Q6XR72 485 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 KBTBD2Q8IY47 623 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 RMDN3Q96TC7 470 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 TACO1Q9BSH4 297 aaKnown RBP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 SLC26A6Q9BXS9 759 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 RHOBTB2Q9BYZ6 727 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 ABHD16BQ9H3Z7 469 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 RIOX1Q9H6W3 641 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 XPNPEP3Q9NQH7 507 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 PDGFCQ9NRA1 345 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 RBM28Q9NW13 759 aaKnown RBP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 DNAJC28Q9NX36 388 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 PPP4R1LQ9P1A2 415 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 IP6K2Q9UHH9 426 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 DDX20Q9UHI6 824 aaKnown RBP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 EDARQ9UNE0 448 aa5.32□□□□□ -1.56
ATXN3-222ENST00000553570 LUC7L2Q9Y383 392 aaKnown RBP5.32□□□□□ -1.56
ATXN3-222ENST00000553570 WDR19Q8NEZ3 1342 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 MYO9BQ13459 2157 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 KLHL33A6NCF5 533 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 SMCO2A6NFE2 343 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 SEPT4O43236 478 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 CYTH3O43739 400 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 SNUPNO95149 360 aaKnown RBP5.31□□□□□ -1.56
ATXN3-222ENST00000553570 LPLP06858 475 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 MYL3P08590 195 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 AKR1A1P14550 325 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 ZSCAN20P17040 1043 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-222ENST00000553570 PDIA3P30101 505 aaKnown RBP5.31□□□□□ -1.56
ATXN3-222ENST00000553570 CSF2RBP32927 897 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 EPHB4P54760 987 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 PPP2CBP62714 309 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 PPP2CAP67775 309 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 BEX3Q00994 111 aa5.31□□□□□ -1.56
ATXN3-222ENST00000553570 STILQ15468 1287 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms