RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SKIV2LQ15477 1246 aaKnown RBP15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 DENND5BQ6ZUT9 1274 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 GRASPQ7Z6J2 395 aaPredicted RBP15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 ZNF677Q86XU0 584 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 TC2NQ8N9U0 490 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 STK32AQ8WU08 396 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 CPLX3Q8WVH0 158 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 KCTD13Q8WZ19 329 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 SLC4A5Q9BY07 1137 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 LUC7L2Q9Y383 392 aaKnown RBP15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 ANAPC1Q9H1A4 1944 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 MED7O43513 233 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 CYP1A1P04798 512 aaPredicted RBP15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 RHOP08100 348 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 ZDHHC11BP0C7U3 371 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 CSH1P0DML2 217 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 CSH2P0DML3 217 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 PTPN2P17706 415 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 KRT9P35527 623 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 PDE6CP51160 858 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 ARID5AQ03989 594 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 SFMBT2Q5VUG0 894 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 TAF3Q5VWG9 929 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 EP400NLQ6ZTU2 488 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 ZNF571Q7Z3V5 609 aaPredicted RBP15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 NUP93Q8N1F7 819 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 SHKBP1Q8TBC3 707 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 TCEAL4Q96EI5 215 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 CORO1BQ9BR76 489 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 NUCKS1Q9H1E3 243 aaKnown RBP15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 POMKQ9H5K3 350 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 HESX1Q9UBX0 185 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 NENFQ9UMX5 172 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 NCANO14594 1321 aa15.67■□□□□ 0.1
MTHFD1-204ENST00000553405 GOLGA6L3A6NEY3 463 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 ANXA13P27216 316 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 NOMO3P69849 1222 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 PDCLQ13371 301 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 SMAD2Q15796 467 aaKnown RBP15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 ASIC2Q16515 512 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 PABPC1LQ4VXU2 614 aaKnown RBP15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 PM20D1Q6GTS8 502 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 TMEM110Q86TL2 294 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 ITIH5Q86UX2 942 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 PASD1Q8IV76 773 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 C1orf131Q8NDD1 294 aaKnown RBP15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 SLC30A5Q8TAD4 765 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 ITFG1Q8TB96 612 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 HSFY1Q96LI6 401 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 ZNF512Q96ME7 567 aaPredicted RBP15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 AGPAT1Q99943 283 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 HAUS4Q9H6D7 363 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 COMMD8Q9NX08 183 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 ARHGAP20Q9P2F6 1191 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 TJP2Q9UDY2 1190 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 CLUHO75153 1309 aa15.66■□□□□ 0.1
MTHFD1-204ENST00000553405 LSM8O95777 96 aaKnown RBP15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 PLEKP08567 350 aaPredicted RBP15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 SKILP12757 684 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 UNGP13051 313 aaPredicted RBP15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 FECHP22830 423 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 MTHFRP42898 656 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 ADKP55263 362 aaKnown RBP15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 CBX2Q14781 532 aaPredicted RBP15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 VEPH1Q14D04 833 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 PTPN20Q4JDL3 420 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 ATAT1Q5SQI0 421 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 CES5AQ6NT32 575 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 CCDC186Q7Z3E2 898 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 FMNL3Q8IVF7 1028 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 DRC7Q8IY82 874 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 SCML4Q8N228 414 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 LEMD2Q8NC56 503 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 OR8K1Q8NGG5 319 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 RIPOR3Q96MK2 946 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 NECTIN4Q96NY8 510 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 CPXM1Q96SM3 734 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 CYLDQ9NQC7 956 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 ASAH2Q9NR71 780 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 ABHD10Q9NUJ1 306 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 THEGQ9P2T0 379 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 SCML2Q9UQR0 700 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 MYO16Q9Y6X6 1858 aa15.65■□□□□ 0.1
MTHFD1-204ENST00000553405 A0A0C4DFX4 3053 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 DDX3XO00571 662 aaKnown RBP eCLIP15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 RTN3O95197 1032 aaPredicted RBP15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 CEBPBP17676 345 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 YWHAQP27348 245 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 RGS7P49802 495 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 CENPCQ03188 943 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 TAF10Q12962 218 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 CLEC16AQ2KHT3 1053 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 ASTE1Q2TB18 679 aaPredicted RBP15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 SNX30Q5VWJ9 437 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 SCD5Q86SK9 330 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 ELMOD1Q8N336 334 aa15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 ZNF397Q8NF99 534 aaPredicted RBP15.64■□□□□ 0.09
MTHFD1-204ENST00000553405 NMUR1Q9HB89 426 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms