RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 LRRC63Q05C16 580 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 INCA1Q0VD86 236 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 TAF10Q12962 218 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 TRIM68Q6AZZ1 485 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 FUKQ8N0W3 1084 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 SPEM1Q8N4L4 309 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 CPA6Q8N4T0 437 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 KIAA1958Q8N8K9 716 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 RIN3Q8TB24 985 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 SH3RF2Q8TEC5 729 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 NELL1Q92832 810 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 ATP2A3Q93084 1043 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 FBXO32Q969P5 355 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 EXOC4Q96A65 974 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 FAXDC2Q96IV6 333 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 KCNK16Q96T55 309 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 NIF3L1Q9GZT8 377 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 DUS2Q9NX74 493 aaKnown RBP13.75□□□□□ -0.21
ACTN1-207ENST00000553290 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-207ENST00000553290 PTPRZ1P23471 2315 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-207ENST00000553290 DMDP11532 3685 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 MYH10P35580 1976 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 FAM186AA6NE01 2351 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 TRDMT1O14717 391 aaKnown RBP13.74□□□□□ -0.21
ACTN1-207ENST00000553290 TNFRSF10BO14763 440 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 SLC16A3O15427 465 aaKnown RBP13.74□□□□□ -0.21
ACTN1-207ENST00000553290 AP1G2O75843 785 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 ABL1P00519 1130 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 ARSAP15289 507 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 PPP1R2P41236 205 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 CXCL12P48061 93 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 MXI1P50539 228 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 SLC7A9P82251 487 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 GRSF1Q12849 480 aaKnown RBP eCLIP13.74□□□□□ -0.21
ACTN1-207ENST00000553290 IFRD2Q12894 506 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-207ENST00000553290 NR1H3Q13133 447 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 STIM1Q13586 685 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 CCINQ13939 588 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 ADSSL1Q8N142 457 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 TTC39CQ8N584 583 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 ZBTB44Q8NCP5 570 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 FBXL13Q8NEE6 735 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 TTC16Q8NEE8 873 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 EEF2KMTQ96G04 330 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 NT5C1AQ9BXI3 368 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 APOBEC3GQ9HC16 384 aaKnown RBP13.74□□□□□ -0.21
ACTN1-207ENST00000553290 CSNK1G1Q9HCP0 422 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 KRT82Q9NSB4 513 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 RBM12Q9NTZ6 932 aaKnown RBP13.74□□□□□ -0.21
ACTN1-207ENST00000553290 IL37Q9NZH6 218 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 HMGXB4Q9UGU5 601 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 WDR87Q6ZQQ6 2873 aa13.74□□□□□ -0.21
ACTN1-207ENST00000553290 OTOL1A6NHN0 477 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-207ENST00000553290 PSMA7O14818 248 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 OLFM2O95897 454 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 OAS1P00973 400 aaKnown RBP13.73□□□□□ -0.21
ACTN1-207ENST00000553290 CCDC130P13994 396 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 SLC5A3P53794 718 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 ORC1Q13415 861 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 GAS6Q14393 721 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 EML3Q32P44 896 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 TMEM196Q5HYL7 178 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 WDR44Q5JSH3 913 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 SNX30Q5VWJ9 437 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 ANKRD40Q6AI12 368 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 TSSK4Q6SA08 328 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 DDX42Q86XP3 938 aaKnown RBP eCLIP13.73□□□□□ -0.21
ACTN1-207ENST00000553290 ZC3H3Q8IXZ2 948 aaKnown RBP13.73□□□□□ -0.21
ACTN1-207ENST00000553290 SLC2A14Q8TDB8 520 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 ERCC4Q92889 916 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-207ENST00000553290 HNRNPABQ99729 332 aaKnown RBP13.73□□□□□ -0.21
ACTN1-207ENST00000553290 SMOQ99835 787 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 RNF38Q9H0F5 515 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 FBXO44Q9H4M3 255 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 ECT2Q9H8V3 914 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.73□□□□□ -0.21
ACTN1-207ENST00000553290 FAM49BQ9NUQ9 324 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 RAB20Q9NX57 234 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 WNT6Q9Y6F9 365 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 FRYLO94915 3013 aa13.73□□□□□ -0.21
ACTN1-207ENST00000553290 FAM92AA1XBS5 289 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 LEFTY2O00292 366 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 LILRB5O75023 590 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 CILPO75339 1184 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 PAPSS2O95340 614 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-207ENST00000553290 NFATC1O95644 943 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 FAM200BP0CF97 657 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 TDGF1P13385 188 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 CD58P19256 250 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 GJA4P35212 333 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 PMS1P54277 932 aaKnown RBP13.72□□□□□ -0.21
ACTN1-207ENST00000553290 MAP3K7CLP57077 242 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 SATB1Q01826 763 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 TCERG1LQ5VWI1 586 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 C12orf29Q8N999 325 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 ZMIZ2Q8NF64 920 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 SCAMP5Q8TAC9 235 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 SEMA4DQ92854 862 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 CYFIP2Q96F07 1278 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms