RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ACO1P21399 889 aaKnown RBP20.44■□□□□ 0.86
PTCH1-227ENST00000553256 AVPR1AP37288 418 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 PPP3CCP48454 512 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 SLC5A3P53794 718 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 CUL2Q13617 745 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 PPP1R26Q5T8A7 1209 aaPredicted RBP20.44■□□□□ 0.86
PTCH1-227ENST00000553256 RBM43Q6ZSC3 357 aaKnown RBP20.44■□□□□ 0.86
PTCH1-227ENST00000553256 GPRIN1Q7Z2K8 1008 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 MAML2Q8IZL2 1156 aaPredicted RBP20.44■□□□□ 0.86
PTCH1-227ENST00000553256 ARL14EPQ8N8R7 260 aaPredicted RBP20.44■□□□□ 0.86
PTCH1-227ENST00000553256 MLKLQ8NB16 471 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 OVCA2Q8WZ82 227 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 CYFIP2Q96F07 1278 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 COMMD8Q9NX08 183 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 ARHGAP26Q9UNA1 814 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 PTPN5P54829 565 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 SLC7A9P82251 487 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 TNK2Q07912 1038 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 ARHGAP17Q68EM7 881 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 TXNDC11Q6PKC3 985 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 TTC39CQ8N584 583 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 ZFRQ96KR1 1074 aaKnown RBP20.43■□□□□ 0.86
PTCH1-227ENST00000553256 PNPLA8Q9NP80 782 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 GTSE1Q9NYZ3 720 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 EHD2Q9NZN4 543 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 PIAS3Q9Y6X2 628 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 ATP8B3O60423 1300 aa20.43■□□□□ 0.86
PTCH1-227ENST00000553256 TRAV19A0A0A6YYK7 116 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 FAM170BA6NMN3 283 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 RTN3O95197 1032 aaPredicted RBP20.42■□□□□ 0.86
PTCH1-227ENST00000553256 GNA14O95837 355 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 YWHAQP27348 245 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 SOX9P48436 509 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 PLCB2Q00722 1185 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 KCNH2Q12809 1159 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 DPCR1Q3MIW9 517 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 CCDC40Q4G0X9 1142 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 ZNF852Q6ZMS4 543 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 CCDC150Q8NCX0 1101 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 KAT5Q92993 513 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 TMEM176AQ96HP8 235 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 NELL2Q99435 816 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 TRPM5Q9NZQ8 1165 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 CACNA1IQ9P0X4 2223 aa20.42■□□□□ 0.86
PTCH1-227ENST00000553256 DPYSL4O14531 572 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 USP17L7P0C7H9 530 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 HDCP19113 662 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 ADORA2BP29275 332 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 RPS9P46781 194 aaKnown RBP20.41■□□□□ 0.86
PTCH1-227ENST00000553256 MAP3K7CLP57077 242 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 KIAA1958Q8N8K9 716 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 PHOX2BQ99453 314 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 MED10Q9BTT4 135 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 DUSP16Q9BY84 665 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 GKN1Q9NS71 199 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 USP3Q9Y6I4 520 aa20.41■□□□□ 0.86
PTCH1-227ENST00000553256 MAN2B1O00754 1011 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 FAM200BP0CF97 657 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 CHRNB1P11230 501 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 CTHP32929 405 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 KIF11P52732 1056 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 MTF1Q14872 753 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 ZNF394Q53GI3 561 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 TRIM68Q6AZZ1 485 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 TTC30AQ86WT1 665 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 YAF2Q8IY57 180 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 EHBP1Q8NDI1 1231 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 FAM122AQ96E09 287 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 MSANTD3Q96H12 275 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 ZSWIM1Q9BR11 485 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 NUP62CLQ9H1M0 184 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 C8orf33Q9H7E9 229 aaPredicted RBP20.4■□□□□ 0.86
PTCH1-227ENST00000553256 TRPC7Q9HCX4 862 aa20.4■□□□□ 0.86
PTCH1-227ENST00000553256 SPECC1L-ADORA2AF8WAN1 911 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 H0Y858 1186 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 CLSTN1O94985 981 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 CKMP06732 381 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 TUBP50607 506 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 ZNF132P52740 706 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 PKDCCQ504Y2 493 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 RAB41Q5JT25 222 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 MAMSTRQ6ZN01 415 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 RALGPS2Q86X27 583 aaPredicted RBP20.39■□□□□ 0.85
PTCH1-227ENST00000553256 ARHGEF19Q8IW93 802 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 PDZD8Q8NEN9 1154 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 SH3RF2Q8TEC5 729 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 OSCP1Q8WVF1 389 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 FAM3CQ92520 227 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 FBXO32Q969P5 355 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 KREMEN1Q96MU8 473 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 SLITRK1Q96PX8 696 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 UBXN6Q9BZV1 441 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 OSER1Q9NX31 292 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 GMIPQ9P107 970 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 CHORDC1Q9UHD1 332 aaPredicted RBP20.39■□□□□ 0.85
PTCH1-227ENST00000553256 CNTN6Q9UQ52 1028 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 SCML2Q9UQR0 700 aa20.39■□□□□ 0.85
PTCH1-227ENST00000553256 HELZP42694 1942 aaKnown RBP20.39■□□□□ 0.85
PTCH1-227ENST00000553256 MIA3Q5JRA6 1907 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 RNF225M0QZC1 329 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms