RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 IZUMO3Q5VZ72 239 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 LEKR1Q6ZMV7 388 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 OSTM1Q86WC4 334 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 ANKRD52Q8NB46 1076 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 B3GALNT2Q8NCR0 500 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 ACTL9Q8TC94 416 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 CD99L2Q8TCZ2 262 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 FAM172AQ8WUF8 416 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 PWWP2AQ96N64 755 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 SLC4A5Q9BY07 1137 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 DNAI2Q9GZS0 605 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 C10orf88Q9H8K7 445 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 TMBIM4Q9HC24 238 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 SLC38A7Q9NVC3 462 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 PSD3Q9NYI0 1048 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 PADI3Q9ULW8 664 aa9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 TIMM13Q9Y5L4 95 aaPredicted RBP9.52□□□□□ -0.88
RAB3IP-218ENST00000553099 ARL5CA6NH57 179 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 HMGB1P1B2RPK0 211 aaPredicted RBP9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 CLDN5O00501 218 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 ACSL3O95573 720 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 DESP17661 470 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 IVDP26440 423 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 TKTP29401 623 aaKnown RBP9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 ARSEP51690 589 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 SNX16P57768 344 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 ACAP1Q15027 740 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 DEFB115Q30KQ5 88 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 PAN2Q504Q3 1202 aaKnown RBP9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 ARHGAP17Q68EM7 881 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 PCSK9Q8NBP7 692 aaKnown RBP9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 GSTCDQ8NEC7 633 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 FAM149B1Q96BN6 582 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 TSPAN18Q96SJ8 248 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 MED10Q9BTT4 135 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 TRAIPQ9BWF2 469 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 EPB41L4BQ9H329 900 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 GPATCH2LQ9NWQ4 482 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 MIOSQ9NXC5 875 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 INPP5FQ9Y2H2 1132 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 THSD7BQ9C0I4 1608 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 GRIN2DO15399 1336 aa9.52□□□□□ -0.89
RAB3IP-218ENST00000553099 TP73O15350 636 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 GABBR2O75899 941 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 POMCP01189 267 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 LRPAP1P30533 357 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 PTPN7P35236 360 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 PCK1P35558 622 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 VCPP55072 806 aaKnown RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 MGAT3Q09327 533 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 GPS1Q13098 491 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 ITGA7Q13683 1181 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 KRT81Q14533 505 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 CCDC14Q49A88 953 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 DSTYKQ6XUX3 929 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 TMEM110Q86TL2 294 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 CRYBG2Q8N1P7 616 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 TAB3Q8N5C8 712 aaPredicted RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 TOP6BLQ8N6T0 577 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 RAET1EQ8TD07 263 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 MAK16Q9BXY0 300 aaKnown RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 CAPS2Q9BXY5 557 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 CDC42EP4Q9H3Q1 356 aaKnown RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 DDX43Q9NXZ2 648 aaKnown RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 NOVA2Q9UNW9 492 aaKnown RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 RIPK2O43353 540 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 MGEA5O60502 916 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 RARGP13631 454 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 TFE3P19532 575 aaPredicted RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 SLCO1A2P46721 670 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 EIF3BP55884 814 aaKnown RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 SLC8A3P57103 927 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 ADIGQ0VDE8 80 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 PPP6R3Q5H9R7 873 aaPredicted RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 MDH1BQ5I0G3 518 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 B4GALNT4Q76KP1 1039 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 RNF180Q86T96 592 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 ALLCQ8N6M5 410 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 C3orf58Q8NDZ4 430 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 KLHDC9Q8NEP7 349 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 HASPINQ8TF76 798 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 SENP8Q96LD8 212 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 PAAF1Q9BRP4 392 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 DDX23Q9BUQ8 820 aaKnown RBP9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 FAM129AQ9BZQ8 928 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 RABEP2Q9H5N1 569 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 CHST12Q9NRB3 414 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 SRRDQ9UH36 339 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 NEU2Q9Y3R4 380 aa9.51□□□□□ -0.89
RAB3IP-218ENST00000553099 I3L4J1 428 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 KLRC2P26717 231 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 GNGT1P63211 74 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 OASLQ15646 514 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 ZC3H12AQ5D1E8 599 aaKnown RBP9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 SPDYCQ5MJ68 293 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 BBS12Q6ZW61 710 aa9.5□□□□□ -0.89
RAB3IP-218ENST00000553099 HOOK3Q86VS8 718 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms