RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 ORC1Q13415 861 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 GAB4Q2WGN9 574 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 ZNF568Q3ZCX4 644 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 NCAPH2Q6IBW4 605 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 KDM7AQ6ZMT4 941 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 MAEAQ7L5Y9 396 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 SFTPA1Q8IWL2 248 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 THEM5Q8N1Q8 247 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 ARL14EPQ8N8R7 260 aaPredicted RBP9.41□□□□□ -0.9
PRKCH-203ENST00000552875 RFFLQ8WZ73 363 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 SKA1Q96BD8 255 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 NUP58Q9BVL2 599 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 OSGEPQ9NPF4 335 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 DEC1Q9P2X7 70 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 TNFSF13BQ9Y275 285 aa9.41□□□□□ -0.9
PRKCH-203ENST00000552875 H0Y8X5 98 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 ADAMTS3O15072 1205 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 YKT6O15498 198 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 XPOTO43592 962 aaKnown RBP9.4□□□□□ -0.9
PRKCH-203ENST00000552875 LYPLA2O95372 231 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 MPOP05164 745 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 HAPLN1P10915 354 aaPredicted RBP9.4□□□□□ -0.9
PRKCH-203ENST00000552875 PFKLP17858 780 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 WASP42768 502 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 LSSP48449 732 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 RARRES1P49788 294 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 C21orf59P57076 290 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 RPL10AP62906 217 aaKnown RBP9.4□□□□□ -0.9
PRKCH-203ENST00000552875 FOXK1P85037 733 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 IL9RQ01113 521 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 GAD2Q05329 585 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 STARD3Q14849 445 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 FILIP1Q7Z7B0 1213 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 METTL23Q86XA0 190 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 NSUN7Q8NE18 718 aaKnown RBP9.4□□□□□ -0.9
PRKCH-203ENST00000552875 SPATA20Q8TB22 786 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 TRMT2BQ96GJ1 504 aaKnown RBP9.4□□□□□ -0.9
PRKCH-203ENST00000552875 TCHPQ9BT92 498 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 CCDC113Q9H0I3 377 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 ZCWPW1Q9H0M4 648 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 ABI2Q9NYB9 513 aaPredicted RBP9.4□□□□□ -0.9
PRKCH-203ENST00000552875 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
PRKCH-203ENST00000552875 TBC1D14Q9P2M4 693 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 DSEQ9UL01 958 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 STARD13Q9Y3M8 1113 aa9.4□□□□□ -0.9
PRKCH-203ENST00000552875 HELZP42694 1942 aaKnown RBP9.4□□□□□ -0.9
PRKCH-203ENST00000552875 USP9YO00507 2555 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-203ENST00000552875 MYO16Q9Y6X6 1858 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 GFRA2O00451 464 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 TRIM66O15016 1216 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 EDIL3O43854 480 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 ACADMP11310 421 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 CKMT2P17540 419 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 TNFRSF8P28908 595 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 RBMS1P29558 406 aaKnown RBP9.39□□□□□ -0.91
PRKCH-203ENST00000552875 AARSP49588 968 aaKnown RBP eCLIP9.39□□□□□ -0.91
PRKCH-203ENST00000552875 FXR2P51116 673 aaKnown RBP eCLIP9.39□□□□□ -0.91
PRKCH-203ENST00000552875 RCAN1P53805 252 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 ATP2C1P98194 919 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-203ENST00000552875 GRIN1Q05586 938 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 ARL13BQ3SXY8 428 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 USP53Q70EK8 1073 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 DCP1BQ8IZD4 617 aaKnown RBP9.39□□□□□ -0.91
PRKCH-203ENST00000552875 CEP120Q8N960 986 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 TERB1Q8NA31 727 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 C1orf216Q8TAB5 229 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 VCPIP1Q96JH7 1222 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 IFT74Q96LB3 600 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 SLC22A12Q96S37 553 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 GABRG3Q99928 467 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.39□□□□□ -0.91
PRKCH-203ENST00000552875 LRRC2Q9BYS8 371 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 SLC25A18Q9H1K4 315 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 IL25Q9H293 177 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 POLR1BQ9H9Y6 1135 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 ITM2CQ9NQX7 267 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 USP36Q9P275 1121 aaKnown RBP9.39□□□□□ -0.91
PRKCH-203ENST00000552875 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 PCDHB5Q9Y5E4 795 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 FLNCQ14315 2725 aa9.39□□□□□ -0.91
PRKCH-203ENST00000552875 A0A1B0GTQ1 180 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 K7ERI5 159 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 LEFTY2O00292 366 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 KCNK3O14649 394 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 EIF5BO60841 1220 aaKnown RBP9.38□□□□□ -0.91
PRKCH-203ENST00000552875 CDC45O75419 566 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 SLITRK3O94933 977 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 BAG4O95429 457 aaKnown RBP9.38□□□□□ -0.91
PRKCH-203ENST00000552875 GJB6O95452 261 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 MT-CO3P00414 261 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 MCF2P10911 925 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 XRCC6P12956 609 aaKnown RBP eCLIP9.38□□□□□ -0.91
PRKCH-203ENST00000552875 GCFC2P16383 781 aaKnown RBP9.38□□□□□ -0.91
PRKCH-203ENST00000552875 ITGB6P18564 788 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 CYP3A5P20815 502 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 LRPAP1P30533 357 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 ZNF132P52740 706 aa9.38□□□□□ -0.91
PRKCH-203ENST00000552875 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-203ENST00000552875 MESP2Q0VG99 397 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms