RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 GATMP50440 423 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 ZNF143P52747 638 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-224ENST00000552812 C2orf54Q08AI8 447 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
CACNB3-224ENST00000552812 MFSD5Q6N075 450 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 CCDC70Q6NSX1 233 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.85□□□□□ -0.51
CACNB3-224ENST00000552812 SLC26A9Q7LBE3 791 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 POLNQ7Z5Q5 900 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 PIGZQ86VD9 579 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 CPNE8Q86YQ8 564 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 KATNAL2Q8IYT4 538 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 TMEM199Q8N511 208 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 ANKRD7Q92527 254 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 TSC1Q92574 1164 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 PKMYT1Q99640 499 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 CSNK1G1Q9HCP0 422 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 PRDM10Q9NQV6 1147 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 SMARCAL1Q9NZC9 954 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 FAN1Q9Y2M0 1017 aa11.85□□□□□ -0.51
CACNB3-224ENST00000552812 SF3B1O75533 1304 aaKnown RBP eCLIP11.84□□□□□ -0.51
CACNB3-224ENST00000552812 TRIM43BA6NCK2 446 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 C2CD4BA6NLJ0 364 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 F8VP50 259 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 CLDN5O00501 218 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 DGKIO75912 1065 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 FGGP02679 453 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 PYGMP11217 842 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 DESP17661 470 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 GPD1P21695 349 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 PPP2R5EQ16537 467 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 CCDC142Q17RM4 750 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 CC2D1AQ6P1N0 951 aaPredicted RBP11.84□□□□□ -0.51
CACNB3-224ENST00000552812 UBE2Q1Q7Z7E8 422 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 SCUBE3Q8IX30 993 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 OR10T2Q8NGX3 314 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 MYLPFQ96A32 169 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 TRIM43Q96BQ3 446 aaPredicted RBP11.84□□□□□ -0.51
CACNB3-224ENST00000552812 NCAPGQ9BPX3 1015 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 CNPY3Q9BT09 278 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 PRDM5Q9NQX1 630 aaPredicted RBP11.84□□□□□ -0.51
CACNB3-224ENST00000552812 RBM12Q9NTZ6 932 aaKnown RBP11.84□□□□□ -0.51
CACNB3-224ENST00000552812 ASNSD1Q9NWL6 643 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 MARCH5Q9NX47 278 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 USTQ9Y2C2 406 aa11.84□□□□□ -0.51
CACNB3-224ENST00000552812 TARSL2A2RTX5 802 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 DPYSL4O14531 572 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 AP1G2O75843 785 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 RNF8O76064 485 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 BAIAP3O94812 1187 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 AMHP03971 560 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 GALTP07902 379 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 CSF2RAP15509 400 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 ITGB8P26012 769 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 SLC11A1P49279 550 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 TAS2R40P59535 323 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 RNASE9P60153 205 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 ZNF211Q13398 564 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 LONRF2Q1L5Z9 754 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 GLE1Q53GS7 698 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 EFHC1Q5JVL4 640 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 C4orf50Q6ZRC1 276 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 EMC1Q8N766 993 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 EXD1Q8NHP7 514 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 RUBCNQ92622 972 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 TOP1MTQ969P6 601 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 PIWIL1Q96J94 861 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 ANKZF1Q9H8Y5 726 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 LRRC4Q9HBW1 653 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 PNPLA8Q9NP80 782 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 GOLGA6L10A0A0M3HER8 536 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 CARNS1A5YM72 827 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 PIK3R2O00459 728 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 KRIT1O00522 736 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 SART1O43290 800 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 LRCH4O75427 683 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 BEST1O76090 585 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 FBXO21O94952 628 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 ZRANB2O95218 330 aaKnown RBP eCLIP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 KRT7P08729 469 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 PDGFRAP16234 1089 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 FGFR3P22607 806 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 PCK1P35558 622 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 SSR1P43307 286 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 MAP3K7CLP57077 242 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 ADIGQ0VDE8 80 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 MRPL58Q14197 206 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 HADHQ16836 314 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 DCP1BQ8IZD4 617 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 SMOQ99835 787 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 OXCT2Q9BYC2 517 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 MCOLN1Q9GZU1 580 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 ZCWPW1Q9H0M4 648 aa11.83□□□□□ -0.52
CACNB3-224ENST00000552812 DDX56Q9NY93 547 aaKnown RBP11.83□□□□□ -0.52
CACNB3-224ENST00000552812 OR6C75A6NL08 312 aa11.82□□□□□ -0.52
CACNB3-224ENST00000552812 HSF2BPO75031 334 aa11.82□□□□□ -0.52
CACNB3-224ENST00000552812 UPP2O95045 317 aa11.82□□□□□ -0.52
CACNB3-224ENST00000552812 GLI1P08151 1106 aa11.82□□□□□ -0.52
CACNB3-224ENST00000552812 RHOXF2BP0C7M4 288 aa11.82□□□□□ -0.52
CACNB3-224ENST00000552812 LCP1P13796 627 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms