RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 PIRTP0C851 137 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 SPATA31D3P0C874 917 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 CDC25CP30307 473 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 PTGISQ16647 500 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 SPATA31D4Q6ZUB0 917 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 ADAM2Q99965 735 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 RHOBTB2Q9BYZ6 727 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 HACD3Q9P035 362 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 PACSIN3Q9UKS6 424 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 AP4E1Q9UPM8 1137 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 C16orf46Q6P387 395 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 TEPSINQ96N21 525 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 SMIM10L2AP0DMW4 78 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 SMIM10L2BP0DMW5 78 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 ITIH2P19823 946 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 ELK3P41970 407 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 FKBP1AP62942 108 aaKnown RBP11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 TTC27Q6P3X3 843 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 LAYNQ6UX15 382 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 MYCBPAPQ8TBZ2 947 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 HELQQ8TDG4 1101 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 AENQ8WTP8 325 aaKnown RBP11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 NAALADL1Q9UQQ1 740 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 KCNA3P22001 575 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 RASSF2P50749 326 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 SEMA3FQ13275 785 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 POU6F1Q14863 301 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 SNCBQ16143 134 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 PTPN20Q4JDL3 420 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 XRRA1Q6P2D8 792 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 FAM183BPQ6ZVS7 135 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 LRRC37BQ96QE4 947 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 GMLQ99445 158 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 LGMNQ99538 433 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 DCLK3Q9C098 648 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 WDCPQ9H6R7 721 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 RAB21Q9UL25 225 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 SLC39A10Q9ULF5 831 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 P4HA2O15460 535 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 GZMAP12544 262 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 HNRNPLLQ8WVV9 542 aaKnown RBP11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 ABHD16BQ9H3Z7 469 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 DIS3Q9Y2L1 958 aaKnown RBP11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 CXCL11O14625 94 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 THP07101 528 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 HSPA9P38646 679 aaKnown RBP11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 HYIQ5T013 277 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 GLB1LQ6UWU2 654 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 PYROXD2Q8N2H3 581 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 XPNPEP3Q9NQH7 507 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 C20orf96Q9NUD7 363 aaPredicted RBP11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 ZFP69BQ9UJL9 534 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 RPS6KL1Q9Y6S9 549 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 SOAT2O75908 522 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 LMO2P25791 158 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 SLC39A4Q6P5W5 647 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 RDM1Q8NG50 284 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 CD248Q9HCU0 757 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 ALS2Q96Q42 1657 aa11.22□□□□□ -0.61
TGFBR1-209ENST00000552516 GOLGA8QA0A0J9YX86 632 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 GTPBP10A4D1E9 387 aaKnown RBP11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 GOLGA8OA6NCC3 632 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 NCF1BA6NI72 391 aaPredicted RBP11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 NCF1CA8MVU1 366 aaPredicted RBP11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 KPNA7A9QM74 516 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 GOLGA8NF8WBI6 632 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 MDM4O15151 490 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 PYGBP11216 843 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 NCF1P14598 390 aaPredicted RBP11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 EFCAB13Q8IY85 973 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 TTC13Q8NBP0 860 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 PPFIBP2Q8ND30 876 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 CNOT10Q9H9A5 744 aaKnown RBP11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 DDX56Q9NY93 547 aaKnown RBP11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 BFARQ9NZS9 450 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 PJA2O43164 708 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 GRIN3BO60391 1043 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 FAM155BO75949 473 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 NDUFV1P49821 464 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 PRAMEP78395 509 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 CEP128Q6ZU80 1094 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 CROCCP2Q86T23 111 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 ARID3BQ8IVW6 561 aaPredicted RBP11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 TMEM237Q96Q45 408 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 TRIM56Q9BRZ2 755 aaKnown RBP11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 MOSPD1Q9UJG1 213 aa11.21□□□□□ -0.61
TGFBR1-209ENST00000552516 C2orf71A6NGG8 1288 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 CDH16O75309 829 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 MAFO75444 373 aaPredicted RBP11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 RGS20O76081 388 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 IL18RAPO95256 599 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 YBX3P16989 372 aaKnown RBP eCLIP11.21□□□□□ -0.622e-8■■■□□ 14.9
TGFBR1-209ENST00000552516 CHRNB2P17787 502 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 EIF4BP23588 611 aaKnown RBP11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 CYP2F1P24903 491 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 FLT3LGP49771 235 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 CPT1AP50416 773 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 TWF1Q12792 350 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms