RNA–Protein interactions for RNA: ENST00000551659.5

TMTC1-206, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMTC1, Length 4,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-206ENST00000551659 PAPD7Q5XG87 772 aaKnown RBP16.3■□□□□ 0.2
TMTC1-206ENST00000551659 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 FBXO32Q969P5 355 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 SAYSD1Q9NPB0 183 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 SMPD4Q9NXE4 827 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.3■□□□□ 0.2
TMTC1-206ENST00000551659 KANSL3Q9P2N6 904 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 C2CD2Q9Y426 696 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 MYH4Q9Y623 1939 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 SMIM24O75264 130 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 CIB2O75838 187 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 RBP3P10745 1247 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 MDH1P40925 334 aaKnown RBP16.3■□□□□ 0.2
TMTC1-206ENST00000551659 RABGGTBP53611 331 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 LRRC8DQ7L1W4 858 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 CROCCP2Q86T23 111 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 PDIK1LQ8N165 341 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 CFAP36Q96G28 342 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 YIPF3Q9GZM5 350 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 APOBEC3GQ9HC16 384 aaKnown RBP16.3■□□□□ 0.2
TMTC1-206ENST00000551659 KIAA1257Q9ULG3 409 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 SLC27A5Q9Y2P5 690 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 LAMA4Q16363 1823 aa16.3■□□□□ 0.2
TMTC1-206ENST00000551659 CCDC85CA6NKD9 419 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 URODP06132 367 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 USP17L7P0C7H9 530 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 ZNF865P0CJ78 1059 aaPredicted RBP16.29■□□□□ 0.2
TMTC1-206ENST00000551659 MYBL2P10244 700 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 CA4P22748 312 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 ACADSBP45954 432 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 CLCNKBP51801 687 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 RPL7AP62424 266 aaKnown RBP16.29■□□□□ 0.2
TMTC1-206ENST00000551659 EFEMP1Q12805 493 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 ATP13A4Q4VNC1 1196 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 RASIP1Q5U651 963 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 ZNF280DQ6N043 979 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 KRT35Q92764 455 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 KCNN4O15554 427 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 PTPN1P18031 435 aaKnown RBP16.29■□□□□ 0.2
TMTC1-206ENST00000551659 C15orf59Q2T9L4 293 aaPredicted RBP16.29■□□□□ 0.2
TMTC1-206ENST00000551659 FAXCQ5TGI0 409 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 RFX8Q6ZV50 586 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 TMEM130Q8N3G9 435 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 LPIN3Q9BQK8 851 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 ENTPD7Q9NQZ7 604 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.29■□□□□ 0.2
TMTC1-206ENST00000551659 PABPN1LA6NDY0 278 aaKnown RBP16.29■□□□□ 0.2
TMTC1-206ENST00000551659 ZNF263O14978 683 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 BST2Q10589 180 aaKnown RBP16.29■□□□□ 0.2
TMTC1-206ENST00000551659 PACS2Q86VP3 889 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 PCDHB18PQ96TA0 734 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 B3GNT5Q9BYG0 378 aa16.29■□□□□ 0.2
TMTC1-206ENST00000551659 HOXA2O43364 376 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 B4GALT4O60513 344 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 STAMBPO95630 424 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 TROVE2P10155 538 aaKnown RBP eCLIP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 RFC1P35251 1148 aaPredicted RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 IRX4P78413 519 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 WDR93Q6P2C0 686 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 PYROXD1Q8WU10 500 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 PABPC5Q96DU9 382 aaKnown RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 ZSWIM1Q9BR11 485 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 MAF1Q9H063 256 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 TARSL2A2RTX5 802 aaKnown RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 CPP00450 1065 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 SELPP16109 830 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 POLE2P56282 527 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 CUL1Q13616 776 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 TARBP2Q15633 366 aaKnown RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 PPP1R26Q5T8A7 1209 aaPredicted RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 MAMDC4Q6UXC1 1216 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 PAWRQ96IZ0 340 aaKnown RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 DDX23Q9BUQ8 820 aaKnown RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 WDCPQ9H6R7 721 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 DDX56Q9NY93 547 aaKnown RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 WNK3Q9BYP7 1800 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 POLR2AP24928 1970 aaKnown RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 MYH8P13535 1937 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 DPYSL4O14531 572 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 MAPK13O15264 365 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 AMPD2Q01433 879 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 MAPRE1Q15691 268 aaKnown RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 ACCSLQ4AC99 568 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 C9orf57Q5W0N0 161 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 FAM228AQ86W67 206 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 NDRG1Q92597 394 aaKnown RBP16.28■□□□□ 0.2
TMTC1-206ENST00000551659 EPAS1Q99814 870 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 TLR10Q9BXR5 811 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 PSD3Q9NYI0 1048 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 USH1CQ9Y6N9 552 aa16.28■□□□□ 0.2
TMTC1-206ENST00000551659 A0A1B0GUL6 1792 aa16.27■□□□□ 0.2
TMTC1-206ENST00000551659 H3BRJ5 948 aa16.27■□□□□ 0.2
TMTC1-206ENST00000551659 APRTP07741 180 aa16.27■□□□□ 0.2
TMTC1-206ENST00000551659 CCL5P13501 91 aa16.27■□□□□ 0.2
TMTC1-206ENST00000551659 CHRNA3P32297 505 aa16.27■□□□□ 0.2
TMTC1-206ENST00000551659 EPHB1P54762 984 aa16.27■□□□□ 0.2
TMTC1-206ENST00000551659 RCOR2Q8IZ40 523 aa16.27■□□□□ 0.2
TMTC1-206ENST00000551659 BBS5Q8N3I7 341 aa16.27■□□□□ 0.2
TMTC1-206ENST00000551659 KIF2BQ8N4N8 673 aa16.27■□□□□ 0.2
TMTC1-206ENST00000551659 TTC13Q8NBP0 860 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms