RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 CYP17A1P05093 508 aa21.99■■□□□ 1.11
CACNB3-218ENST00000550771 DGKEP52429 567 aa21.99■■□□□ 1.11
CACNB3-218ENST00000550771 USP39Q53GS9 565 aaKnown RBP21.99■■□□□ 1.11
CACNB3-218ENST00000550771 RASSF3Q86WH2 238 aa21.99■■□□□ 1.11
CACNB3-218ENST00000550771 DDX42Q86XP3 938 aaKnown RBP eCLIP21.99■■□□□ 1.11
CACNB3-218ENST00000550771 B3GALNT2Q8NCR0 500 aa21.99■■□□□ 1.11
CACNB3-218ENST00000550771 ZNF516Q92618 1163 aa21.99■■□□□ 1.11
CACNB3-218ENST00000550771 SYAP1Q96A49 352 aaPredicted RBP21.99■■□□□ 1.11
CACNB3-218ENST00000550771 ZNF518BQ9C0D4 1074 aa21.99■■□□□ 1.11
CACNB3-218ENST00000550771 GZF1Q9H116 711 aaPredicted RBP21.99■■□□□ 1.11
CACNB3-218ENST00000550771 DPEP3Q9H4B8 488 aa21.99■■□□□ 1.11
CACNB3-218ENST00000550771 VRTNQ9H8Y1 702 aa21.99■■□□□ 1.11
CACNB3-218ENST00000550771 PVALEFA0A1B0GWK0 134 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 BCLAF3A2AJT9 711 aaKnown RBP21.98■■□□□ 1.11
CACNB3-218ENST00000550771 A8MXQ7 604 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 POLR2DO15514 142 aaKnown RBP21.98■■□□□ 1.11
CACNB3-218ENST00000550771 ABL1P00519 1130 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 EIF2DP41214 584 aaKnown RBP21.98■■□□□ 1.11
CACNB3-218ENST00000550771 CACNA2D1P54289 1103 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 MYL6P60660 151 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 MRPS21P82921 87 aaKnown RBP21.98■■□□□ 1.11
CACNB3-218ENST00000550771 DHCR24Q15392 516 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 C2orf27AQ580R0 203 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 NUP93Q8N1F7 819 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 OVCA2Q8WZ82 227 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 CNOT6LQ96LI5 555 aaKnown RBP21.98■■□□□ 1.11
CACNB3-218ENST00000550771 LSM14BQ9BX40 385 aaKnown RBP21.98■■□□□ 1.11
CACNB3-218ENST00000550771 B3GNT5Q9BYG0 378 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 SMOC1Q9H4F8 434 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 TMEM30AQ9NV96 361 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 SMPD4Q9NXE4 827 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 NXF1Q9UBU9 619 aaKnown RBP21.98■■□□□ 1.11
CACNB3-218ENST00000550771 MMP17Q9ULZ9 603 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 PTPRDP23468 1912 aa21.98■■□□□ 1.11
CACNB3-218ENST00000550771 RTN3O95197 1032 aaPredicted RBP21.97■■□□□ 1.11
CACNB3-218ENST00000550771 CAVIN2O95810 425 aa21.97■■□□□ 1.11
CACNB3-218ENST00000550771 PDIA4P13667 645 aaKnown RBP21.97■■□□□ 1.11
CACNB3-218ENST00000550771 KCNA4P22459 653 aa21.97■■□□□ 1.11
CACNB3-218ENST00000550771 YWHAQP27348 245 aa21.97■■□□□ 1.11
CACNB3-218ENST00000550771 CREB5Q02930 508 aa21.97■■□□□ 1.11
CACNB3-218ENST00000550771 KNOP1Q1ED39 458 aaKnown RBP21.97■■□□□ 1.11
CACNB3-218ENST00000550771 HSF5Q4G112 596 aaPredicted RBP21.97■■□□□ 1.11
CACNB3-218ENST00000550771 RNF43Q68DV7 783 aa21.97■■□□□ 1.11
CACNB3-218ENST00000550771 PDZD8Q8NEN9 1154 aa21.97■■□□□ 1.11
CACNB3-218ENST00000550771 CFAP97Q9P2B7 532 aa21.97■■□□□ 1.11
CACNB3-218ENST00000550771 TBC1D14Q9P2M4 693 aa21.97■■□□□ 1.11
CACNB3-218ENST00000550771 EML5Q05BV3 1969 aa21.97■■□□□ 1.11
CACNB3-218ENST00000550771 CNOT1A5YKK6 2376 aaKnown RBP21.96■■□□□ 1.11
CACNB3-218ENST00000550771 CLDN5O00501 218 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 EXOC3O60645 756 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 ADH1CP00326 375 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 PMLP29590 882 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 GBP1P32455 592 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 AP3M2P53677 418 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 SEC13P55735 322 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 CRY1Q16526 586 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 N4BP2L1Q5TBK1 243 aaPredicted RBP21.96■■□□□ 1.11
CACNB3-218ENST00000550771 PMS2CLQ68D20 193 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 TCEAL6Q6IPX3 200 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 GOLGA5Q8TBA6 731 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 TCEAL3Q969E4 200 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 PNKPQ96T60 521 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 BLZF1Q9H2G9 400 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 SLC39A2Q9NP94 309 aa21.96■■□□□ 1.11
CACNB3-218ENST00000550771 HELZP42694 1942 aaKnown RBP21.96■■□□□ 1.11
CACNB3-218ENST00000550771 EPG5Q9HCE0 2579 aa21.95■■□□□ 1.11
CACNB3-218ENST00000550771 A0A0A0MRY4 1105 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 PHACTR2O75167 634 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 MBL2P11226 248 aaPredicted RBP21.95■■□□□ 1.1
CACNB3-218ENST00000550771 CASP1P29466 404 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 CLDN10P78369 228 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 SNX30Q5VWJ9 437 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 ANO7Q6IWH7 933 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 RHBDF2Q6PJF5 856 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 FBXO32Q969P5 355 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 FAM13BQ9NYF5 915 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 ANGPTL2Q9UKU9 493 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 ATP8B3O60423 1300 aa21.95■■□□□ 1.1
CACNB3-218ENST00000550771 E2F8A0AVK6 867 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.94■■□□□ 1.1
CACNB3-218ENST00000550771 KRT37O76014 449 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 ALDH1A2O94788 518 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 KAT7O95251 611 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 APODP05090 189 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 CHRM1P11229 460 aaPredicted RBP21.94■■□□□ 1.1
CACNB3-218ENST00000550771 SLC6A11P48066 632 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 TUBP50607 506 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 SHC2P98077 582 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 IFRD2Q12894 506 aaPredicted RBP21.94■■□□□ 1.1
CACNB3-218ENST00000550771 ST3GAL2Q16842 350 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 CCDC33Q8N5R6 958 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 MDGA1Q8NFP4 955 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 TMEM174Q8WUU8 243 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 OTUB2Q96DC9 234 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 TNIP3Q96KP6 325 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 DUSP9Q99956 384 aaKnown RBP21.94■■□□□ 1.1
CACNB3-218ENST00000550771 EDEM2Q9BV94 578 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 TPSD1Q9BZJ3 242 aa21.94■■□□□ 1.1
CACNB3-218ENST00000550771 SMYD3Q9H7B4 428 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms