RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 THAP1Q9NVV9 213 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 DAGLAQ9Y4D2 1042 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 EPHB6O15197 1021 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 XPAP23025 273 aaPredicted RBP16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 CCNHP51946 323 aaPredicted RBP16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 PARP6Q2NL67 630 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 EXOC3L1Q86VI1 746 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 SRPK1Q96SB4 655 aaKnown RBP16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 KANSL1LA0AUZ9 987 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 KPNA4O00629 521 aaPredicted RBP16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 PRKCBP05771 671 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 Q3C1V9 767 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 SLC10A5Q5PT55 438 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 FBXO33Q7Z6M2 555 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 OR6Y1Q8NGX8 325 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 JPH1Q9HDC5 661 aaPredicted RBP16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 DAPK2Q9UIK4 370 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 AGAP1Q9UPQ3 857 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 ATP5BP06576 529 aaKnown RBP16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 PRKCIP41743 596 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 CHN2P52757 468 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 PTK6Q13882 451 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 MIIPQ5JXC2 388 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 DEPDC1Q5TB30 811 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 RNF217Q8TC41 542 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 PNMA5Q96PV4 448 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 NR1H4Q96RI1 486 aaPredicted RBP16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 TCF7L2Q9NQB0 619 aa16.36■□□□□ 0.21
RBFOX1-212ENST00000550418 SLCO1B7G3V0H7 640 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 RNF225M0QZC1 329 aaPredicted RBP16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 DFFAO00273 331 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 RPA3P35244 121 aaPredicted RBP16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 Q4G0T1 1027 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 DENND1BQ6P3S1 775 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 SCFD2Q8WU76 684 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 CYLDQ9NQC7 956 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 ZSCAN9O15535 394 aaPredicted RBP16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 TLR2O60603 784 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 SMNDC1O75940 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 WFS1O76024 890 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 CHRNA5P30532 468 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 UBE3AQ05086 875 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 DUPD1Q68J44 220 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 MOXD1Q6UVY6 613 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 TSHZ1Q6ZSZ6 1077 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 ZNF398Q8TD17 642 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 USP13Q92995 863 aaPredicted RBP16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 KIF12Q96FN5 646 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 FAR2Q96K12 515 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 DDX50Q9BQ39 737 aaKnown RBP16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 KCNK4Q9NYG8 393 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 TBX20Q9UMR3 447 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 SDR42E2A6NKP2 422 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 PROCP04070 461 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 FDFT1P37268 417 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 ELK3P41970 407 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 SULT1E1P49888 294 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 CASP7P55210 303 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 TMC5Q6UXY8 1006 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 ZNF720Q7Z2F6 126 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 RIN3Q8TB24 985 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 ASAP3Q8TDY4 903 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 PDCD6IPQ8WUM4 868 aaKnown RBP16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 GLMNQ92990 594 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 FAM162AQ96A26 154 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 NDNQ99608 321 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 CNGB3Q9NQW8 809 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 PCYOX1Q9UHG3 505 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 PRR12Q9ULL5 1215 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 IGSF9BQ9UPX0 1349 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 SAC3D1A6NKF1 404 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 ZC3H11AO75152 810 aaKnown RBP eCLIP16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 RPL5P46777 297 aaKnown RBP16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 TEX12Q9BXU0 123 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 NDEL1Q9GZM8 345 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 CHST7Q9NS84 486 aa16.35■□□□□ 0.21
RBFOX1-212ENST00000550418 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 PGM3O95394 542 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 CLEC16AQ2KHT3 1053 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 DPP9Q86TI2 863 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 ZCCHC7Q8N3Z6 543 aaKnown RBP16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 ZCCHC9Q8N567 271 aaKnown RBP16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 ETNPPLQ8TBG4 499 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 BBS2Q9BXC9 721 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 PLEKHA5Q9HAU0 1116 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 SP110Q9HB58 689 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 UTP6Q9NYH9 597 aaKnown RBP16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 AGPSO00116 658 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 SERPINE1P05121 402 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 TGM2P21980 687 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 FAM83EQ2M2I3 478 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 BAP1Q92560 729 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 OSBPL7Q9BZF2 842 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 CASS4Q9NQ75 786 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 ATAD3AQ9NVI7 634 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 DNM1LO00429 736 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 TIMM44O43615 452 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 NCKAP1LP55160 1127 aa16.34■□□□□ 0.21
RBFOX1-212ENST00000550418 PDK4Q16654 411 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms