RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 AGO4Q9HCK5 861 aaKnown RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 DLL4Q9NR61 685 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 SPATA6Q9NWH7 488 aaPredicted RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 YBX2Q9Y2T7 364 aaKnown RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 WDR90Q96KV7 1748 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 GPR75-ASB3A0A0A6YYF3 556 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 FAM171A2A8MVW0 826 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 PIP5K1BO14986 540 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 MATN4O95460 622 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 CKMT1AP12532 417 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 ATP1A3P13637 1013 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 RAC2P15153 192 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 ATF2P15336 505 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 CHMLP26374 656 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 WASP42768 502 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 LIMS1P48059 325 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 ERVFRD-1P60508 538 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 GSTO1P78417 241 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 CTBP1Q13363 440 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 ZNF792Q3KQV3 632 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 ZMYM1Q5SVZ6 1142 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 PPP4R3AQ6IN85 833 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 FAM180BQ6P0A1 224 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 ZNF605Q86T29 641 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 CACNA2D3Q8IZS8 1091 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 SNX33Q8WV41 574 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 SGPP1Q9BX95 441 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 HAPLN2Q9GZV7 340 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 AFF4Q9UHB7 1163 aaKnown RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 SLC4A4Q9Y6R1 1079 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 CNTNAP1P78357 1384 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 LDHCP07864 332 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 H2AFB1P0C5Y9 115 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 H2AFB2P0C5Z0 115 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 VIPR1P32241 457 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 GDNFP39905 211 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 IL12RB1P42701 662 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 PSMC1P62191 440 aaKnown RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 SHROOM1Q2M3G4 852 aaPredicted RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 BMP2KLQ5H9B9 411 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 PRAMEF14Q5SWL7 426 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 FKBP15Q5T1M5 1219 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 PGBD2Q6P3X8 592 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 USP50Q70EL3 339 aaPredicted RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 ZC3H18Q86VM9 953 aaKnown RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 OR1N1Q8NGS0 311 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 UBE2Q2Q8WVN8 375 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 SKA1Q96BD8 255 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 DCPSQ96C86 337 aaKnown RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 EPB41L4AQ9HCS5 686 aaPredicted RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 KCND1Q9NSA2 647 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 DACT1Q9NYF0 836 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 IGSF9Q9P2J2 1179 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.26□□□□□ -1.73
APAF1-208ENST00000549007 CTNND2Q9UQB3 1225 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 DOCK2Q92608 1830 aa4.26□□□□□ -1.73
APAF1-208ENST00000549007 TCRBV7S2A1N4TA0A589 114 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 DDTLA6NHG4 134 aaPredicted RBP4.25□□□□□ -1.73
APAF1-208ENST00000549007 BTN3A1O00481 513 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 NCAM2O15394 837 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 NRP2O60462 931 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 RAP2AP10114 183 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 HAND2P61296 217 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 CREMQ03060 361 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 NFATC3Q12968 1075 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 USP49Q70CQ1 688 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 LARP4Q71RC2 724 aaKnown RBP eCLIP4.25□□□□□ -1.73
APAF1-208ENST00000549007 ALYREFQ86V81 257 aaKnown RBP4.25□□□□□ -1.73
APAF1-208ENST00000549007 ATP11CQ8NB49 1132 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 SLC44A5Q8NCS7 719 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 BRIX1Q8TDN6 353 aaKnown RBP4.25□□□□□ -1.73
APAF1-208ENST00000549007 UIMC1Q96RL1 719 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 DEFB129Q9H1M3 183 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 PIH1D1Q9NWS0 290 aaKnown RBP4.25□□□□□ -1.73
APAF1-208ENST00000549007 TMOD2Q9NZR1 351 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 NCDNQ9UBB6 729 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 FLT1P17948 1338 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 POLR2AP24928 1970 aaKnown RBP4.25□□□□□ -1.73
APAF1-208ENST00000549007 KIAA0391O15091 583 aaKnown RBP4.25□□□□□ -1.73
APAF1-208ENST00000549007 CUTAO60888 179 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 SKAP2O75563 359 aaPredicted RBP4.25□□□□□ -1.73
APAF1-208ENST00000549007 ALDH1A2O94788 518 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 ENDOD1O94919 500 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 BAG3O95817 575 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 PROCP04070 461 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 CASRP41180 1078 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 MAPKAPK2P49137 400 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 MLLT6P55198 1093 aaPredicted RBP4.25□□□□□ -1.73
APAF1-208ENST00000549007 PTH1RQ03431 593 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 SURF1Q15526 300 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 THEMIS2Q5TEJ8 643 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 AFMIDQ63HM1 303 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 ZSCAN25Q6NSZ9 544 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 LDHDQ86WU2 507 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 SLC15A4Q8N697 577 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 OR56A3Q8NH54 315 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 ASB12Q8WXK4 309 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 IQCDQ96DY2 449 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 DYNLL2Q96FJ2 89 aa4.25□□□□□ -1.73
APAF1-208ENST00000549007 TMEM41AQ96HV5 264 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms