RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 MYO1CO00159 1063 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 AP4M1O00189 453 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 CYP2C9P11712 490 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 E2F1Q01094 437 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 KRT17Q04695 432 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 CYP1B1Q16678 543 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 FAM187BQ17R55 369 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 IRF2BP2Q7Z5L9 587 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 CAND1Q86VP6 1230 aaKnown RBP5.03□□□□□ -1.6
CNOT2-216ENST00000548939 ZNF280BQ86YH2 543 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 ZDHHC17Q8IUH5 632 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 IZUMO1Q8IYV9 350 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 ABRAQ8N0Z2 381 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 C16orf52Q8NHV5 167 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 CUL5Q93034 780 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 COQ8BQ96D53 544 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 FYTTD1Q96QD9 318 aaKnown RBP5.03□□□□□ -1.6
CNOT2-216ENST00000548939 EFHD1Q9BUP0 239 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 CNNM1Q9NRU3 951 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 CPA4Q9UI42 421 aa5.03□□□□□ -1.6
CNOT2-216ENST00000548939 CCDC88BA6NC98 1476 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 TCRBV5S1A1TA0A578 114 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 TMEM232C9JQI7 657 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 MYCLP12524 364 aaPredicted RBP5.02□□□□□ -1.61
CNOT2-216ENST00000548939 XRCC6P12956 609 aaKnown RBP eCLIP5.02□□□□□ -1.61
CNOT2-216ENST00000548939 SLC11A2P49281 568 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 HSPA2P54652 639 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 LY6KQ17RY6 165 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 RNASE12Q5GAN4 147 aaKnown RBP5.02□□□□□ -1.61
CNOT2-216ENST00000548939 MEX3CQ5U5Q3 659 aaKnown RBP5.02□□□□□ -1.61
CNOT2-216ENST00000548939 DPY19L3Q6ZPD9 716 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 ADAMTS18Q8TE60 1221 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 NSMCE1Q8WV22 266 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 MMS19Q96T76 1030 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 ADGRE3Q9BY15 652 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 ARMT1Q9H993 441 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 STXBP5LQ9Y2K9 1186 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 MED16Q9Y2X0 877 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 LUC7L2Q9Y383 392 aaKnown RBP5.02□□□□□ -1.61
CNOT2-216ENST00000548939 SBNO2Q9Y2G9 1366 aa5.02□□□□□ -1.61
CNOT2-216ENST00000548939 ADCY10Q96PN6 1610 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 CNTNAP2Q9UHC6 1331 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 ADAM10O14672 748 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 GCATO75600 419 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 VNN1O95497 513 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 A1BGP04217 495 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 THP07101 528 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 TMEM191BP0C7N4 346 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 AKAP5P24588 427 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 DGKEP52429 567 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 WNT3P56703 355 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 LINC00205P59089 165 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 GHRHRQ02643 423 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 RBMS2Q15434 407 aaKnown RBP5.01□□□□□ -1.61
CNOT2-216ENST00000548939 ZIK1Q3SY52 487 aaPredicted RBP5.01□□□□□ -1.61
CNOT2-216ENST00000548939 MGAT5BQ3V5L5 792 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 BCDIN3DQ7Z5W3 292 aaKnown RBP5.01□□□□□ -1.61
CNOT2-216ENST00000548939 SIRT6Q8N6T7 355 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 PRR25Q96S07 402 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 MAP3K14Q99558 947 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 MESP1Q9BRJ9 268 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 MTMR4Q9NYA4 1195 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 AMFRQ9UKV5 643 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 SNX14Q9Y5W7 946 aa5.01□□□□□ -1.61
CNOT2-216ENST00000548939 NUP160Q12769 1436 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 BTBD19C9JJ37 291 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 ALDH2P05091 517 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 KCNA3P22001 575 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 SCP2P22307 547 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 PRKAG1P54619 331 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 DNAJC5GQ8N7S2 189 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 CCDC17Q96LX7 622 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 CGRRF1Q99675 332 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 ASIC5Q9NY37 505 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 SHROOM2Q13796 1616 aa5□□□□□ -1.61
CNOT2-216ENST00000548939 PCF11O94913 1555 aaKnown RBP4.99□□□□□ -1.61
CNOT2-216ENST00000548939 FGAP02671 866 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 PRF1P14222 555 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 VCAM1P19320 739 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 CCKARP32238 428 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 PSG6Q00889 435 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 TWIST1Q15672 202 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 C10orf25Q5T742 122 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 ZBTB46Q86UZ6 589 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 SFTPA1Q8IWL2 248 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 GRAMD1CQ8IYS0 662 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 SLC15A4Q8N697 577 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 PLBD2Q8NHP8 589 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 HPS3Q969F9 1004 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 RSPRY1Q96DX4 576 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 VCPIP1Q96JH7 1222 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 MRGPRX1Q96LB2 322 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 P2RX7Q99572 595 aaKnown RBP4.99□□□□□ -1.61
CNOT2-216ENST00000548939 PIH1D1Q9NWS0 290 aaKnown RBP4.99□□□□□ -1.61
CNOT2-216ENST00000548939 PI4KBQ9UBF8 816 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 PTPRMP28827 1452 aa4.99□□□□□ -1.61
CNOT2-216ENST00000548939 ARID4BQ4LE39 1312 aaPredicted RBP4.98□□□□□ -1.61
CNOT2-216ENST00000548939 FNDC1Q4ZHG4 1894 aaPredicted RBP4.98□□□□□ -1.61
CNOT2-216ENST00000548939 IGKV2D-30A0A075B6S6 120 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms