RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TADA3O75528 432 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 EGFP01133 1207 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 C4BPAP04003 597 aaKnown RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 NR3C1P04150 777 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 FAM163BP0C2L3 166 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 ATICP31939 592 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 SYKP43405 635 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 RAP1GAPP47736 663 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 IFNAR2P48551 515 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 PXNP49023 591 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 NDUFA8P51970 172 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 CACNA2D1P54289 1103 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 DLG4P78352 724 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 KRT85P78386 507 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 AMPD2Q01433 879 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 FAM160A1Q05DH4 1040 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 IFRD2Q12894 506 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 TAF10Q12962 218 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 SRSF5Q13243 272 aaKnown RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 NCOA4Q13772 614 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 SIM2Q14190 667 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 ZNF268Q14587 947 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 MTF1Q14872 753 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 TDRD10Q5VZ19 366 aaKnown RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 CEP135Q66GS9 1140 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 NAIF1Q69YI7 327 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 FSTL4Q6MZW2 842 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 SCARA5Q6ZMJ2 495 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 DENND5BQ6ZUT9 1274 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 SYNPOQ8N3V7 929 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 CPA6Q8N4T0 437 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 B3GALNT2Q8NCR0 500 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 KIAA0895Q8NCT3 520 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 DOCK8Q8NF50 2099 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 PLEKHO2Q8TD55 490 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 SH3RF2Q8TEC5 729 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 PARD3BQ8TEW8 1205 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 OSCP1Q8WVF1 389 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 CHFRQ96EP1 664 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 DOCK6Q96HP0 2047 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 SPATA17Q96L03 361 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 C8orf48Q96LL4 319 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 KCNK16Q96T55 309 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 NOTCH4Q99466 2003 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 MED10Q9BTT4 135 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 B3GNT5Q9BYG0 378 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 ZNF518BQ9C0D4 1074 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 RNF38Q9H0F5 515 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 XYLT2Q9H1B5 865 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 EPC1Q9H2F5 836 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 ECT2Q9H8V3 914 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 POLR3BQ9NW08 1133 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 DMAC2Q9NW81 257 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 SMPD4Q9NXE4 827 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 EHD2Q9NZN4 543 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 GCNT4Q9P109 453 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 CHORDC1Q9UHD1 332 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 USP25Q9UHP3 1055 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 USP18Q9UMW8 372 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 SMG5Q9UPR3 1016 aaKnown RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 WNT6Q9Y6F9 365 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 ZNF840PA6NDX5 716 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 K7ESF4 209 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 LEFTY2O00292 366 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 PDXKO00764 312 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 TRDMT1O14717 391 aaKnown RBP7.13□□□□□ -1.27
SCAF11-211ENST00000547950 SCAMP3O14828 347 aaKnown RBP7.13□□□□□ -1.27
SCAF11-211ENST00000547950 CALUO43852 315 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ATG13O75143 517 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 STAU1O95793 577 aaKnown RBP7.13□□□□□ -1.27
SCAF11-211ENST00000547950 YWHAQP27348 245 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 GJA4P35212 333 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 PDE6CP51160 858 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 AP3M2P53677 418 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 NOP14P78316 857 aaKnown RBP7.13□□□□□ -1.27
SCAF11-211ENST00000547950 SPEM2Q0P670 501 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 NR1H3Q13133 447 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ORC1Q13415 861 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ZNF77Q15935 545 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 RSPO4Q2I0M5 234 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-211ENST00000547950 SGSM1Q2NKQ1 1148 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ZNF699Q32M78 642 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ZNF667Q5HYK9 610 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 TMEM196Q5HYL7 178 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 PKN3Q6P5Z2 889 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 BRICD5Q6PL45 260 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 CEP68Q76N32 757 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ACOT1Q86TX2 421 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 LONP2Q86WA8 852 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 SLC9A9Q8IVB4 645 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ATP2A3Q93084 1043 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 CCDC47Q96A33 483 aaKnown RBP7.13□□□□□ -1.27
SCAF11-211ENST00000547950 EXOC4Q96A65 974 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 CEP295NLQ96MC4 621 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 SLITRK1Q96PX8 696 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 P2RY13Q9BPV8 354 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ELOVL4Q9GZR5 314 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 KCTD10Q9H3F6 313 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 SMYD3Q9H7B4 428 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms