RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 SLCO1B3Q9NPD5 702 aa16.3■□□□□ 0.2
CUX1-211ENST00000546411 ZNF484Q5JVG2 852 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 L3MBTL3Q96JM7 780 aaPredicted RBP16.29■□□□□ 0.2
CUX1-211ENST00000546411 CDT1Q9H211 546 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 GPRC5DQ9NZD1 345 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 CPSF2Q9P2I0 782 aaKnown RBP16.29■□□□□ 0.2
CUX1-211ENST00000546411 CD4P01730 458 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 KCNA2P16389 499 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 HUNKP57058 714 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 STX1BP61266 288 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 KATNAL2Q8IYT4 538 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 JOSD2Q8TAC2 188 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 LRRC19Q9H756 370 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 BCAP29Q9UHQ4 241 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 BARX2Q9UMQ3 279 aaPredicted RBP16.29■□□□□ 0.2
CUX1-211ENST00000546411 FSCN2O14926 492 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 LYPLA2O95372 231 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 NQO1P15559 274 aaKnown RBP16.29■□□□□ 0.2
CUX1-211ENST00000546411 CHRNB2P17787 502 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 CUL3Q13618 768 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 CNGA2Q16280 664 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 ERMARDQ5T6L9 678 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 KLRG1Q96E93 195 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 UNKQ9C0B0 810 aaKnown RBP16.29■□□□□ 0.2
CUX1-211ENST00000546411 MROH8Q9H579 483 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 SARS2Q9NP81 518 aaKnown RBP16.29■□□□□ 0.2
CUX1-211ENST00000546411 C20orf96Q9NUD7 363 aaPredicted RBP16.29■□□□□ 0.2
CUX1-211ENST00000546411 SCOCQ9UIL1 159 aa16.29■□□□□ 0.2
CUX1-211ENST00000546411 UBQLN1Q9UMX0 589 aaKnown RBP16.29■□□□□ 0.2
CUX1-211ENST00000546411 PRG3Q9Y2Y8 225 aaPredicted RBP16.29■□□□□ 0.2
CUX1-211ENST00000546411 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 USP12O75317 370 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 AMPD1P23109 780 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 RBL1P28749 1068 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 PRAMEP78395 509 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 TSTA3Q13630 321 aaPredicted RBP16.28■□□□□ 0.2
CUX1-211ENST00000546411 GSDMBQ8TAX9 411 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 TFB1MQ8WVM0 346 aaKnown RBP16.28■□□□□ 0.2
CUX1-211ENST00000546411 SLITRK1Q96PX8 696 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 SH3GL2Q99962 352 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 IQCA1LA6NCM1 817 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 PMPCBO75439 489 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 AP1G2O75843 785 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 CREB1P16220 341 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 USP10Q14694 798 aaKnown RBP16.28■□□□□ 0.2
CUX1-211ENST00000546411 BBS5Q8N3I7 341 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 EIF1ADQ8N9N8 165 aaKnown RBP16.28■□□□□ 0.2
CUX1-211ENST00000546411 EDEM1Q92611 657 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 SLC39A10Q9ULF5 831 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 NUP98P52948 1817 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 MYH6P13533 1939 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 A0A0B4J269 797 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 GOLGA8CPA6NN73 597 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
CUX1-211ENST00000546411 HMGCRP04035 888 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 FAM200BP0CF97 657 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 MYL2P10916 166 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 EIF4BP23588 611 aaKnown RBP16.28■□□□□ 0.2
CUX1-211ENST00000546411 MAP3K7CLP57077 242 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 CRADDP78560 199 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 GRIK4Q16099 956 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 TTC39BQ5VTQ0 682 aaPredicted RBP16.28■□□□□ 0.2
CUX1-211ENST00000546411 RPAINQ86UA6 219 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 RMDN2Q96LZ7 410 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 SHOC2Q9UQ13 582 aa16.28■□□□□ 0.2
CUX1-211ENST00000546411 CBX6O95503 412 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 CYP2F1P24903 491 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 RPA3P35244 121 aaPredicted RBP16.27■□□□□ 0.2
CUX1-211ENST00000546411 ZNF157P51786 506 aaPredicted RBP16.27■□□□□ 0.2
CUX1-211ENST00000546411 EFHC1Q5JVL4 640 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 PRAMEF19Q5SWL8 479 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 SLC25A41Q8N5S1 370 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 CCDC22O60826 627 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 KDELR1P24390 212 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 EPHX2P34913 555 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 RBBP5Q15291 538 aaKnown RBP16.27■□□□□ 0.2
CUX1-211ENST00000546411 FBXO47Q5MNV8 452 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 ITPRIPL1Q6GPH6 555 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 C12orf56Q8IXR9 622 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 ART4Q93070 314 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 ACO2Q99798 780 aaKnown RBP16.27■□□□□ 0.2
CUX1-211ENST00000546411 TASP1Q9H6P5 420 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 NOCTQ9UK39 431 aaKnown RBP16.27■□□□□ 0.2
CUX1-211ENST00000546411 ANGPTL2Q9UKU9 493 aa16.27■□□□□ 0.2
CUX1-211ENST00000546411 UBA6A0AVT1 1052 aaPredicted RBP16.27■□□□□ 0.19
CUX1-211ENST00000546411 C3orf70A6NLC5 250 aaPredicted RBP16.27■□□□□ 0.19
CUX1-211ENST00000546411 O00370 1275 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 LIASO43766 372 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 ASS1P00966 412 aaKnown RBP16.27■□□□□ 0.19
CUX1-211ENST00000546411 CETPP11597 493 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 CCDC130P13994 396 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 PLEKHO2Q8TD55 490 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 LRGUKQ96M69 825 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 ADA2Q9NZK5 511 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 SLIT2O94813 1529 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 NUP188Q5SRE5 1749 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 CYB561D2O14569 222 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 PLA2G6O60733 806 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 DGKIO75912 1065 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms