RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TARSP26639 723 aaKnown RBP12.97□□□□□ -0.33
COL4A6-209ENST00000545689 PRKCIP41743 596 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 SKOR1P84550 965 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 PTPN11Q06124 597 aaPredicted RBP12.97□□□□□ -0.33
COL4A6-209ENST00000545689 BST2Q10589 180 aaKnown RBP12.97□□□□□ -0.33
COL4A6-209ENST00000545689 EARS2Q5JPH6 523 aaKnown RBP12.97□□□□□ -0.33
COL4A6-209ENST00000545689 OTOP1Q7RTM1 612 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 FAM9CQ8IZT9 166 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 SLITRK1Q96PX8 696 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 BLOC1S4Q9NUP1 217 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 CASZ1Q86V15 1759 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 KANSL1LA0AUZ9 987 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 GPR182O15218 404 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 PRPF4O43172 522 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL4A6-209ENST00000545689 THEMIS2Q5TEJ8 643 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 TDRD10Q5VZ19 366 aaKnown RBP12.97□□□□□ -0.33
COL4A6-209ENST00000545689 PTRHD1Q6GMV3 140 aaKnown RBP12.97□□□□□ -0.33
COL4A6-209ENST00000545689 SLC30A9Q6PML9 568 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 PGM2Q96G03 612 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 PPP1R36Q96LQ0 422 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 CHORDC1Q9UHD1 332 aaPredicted RBP12.97□□□□□ -0.33
COL4A6-209ENST00000545689 A0A087X0B3 334 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 DNALI1O14645 258 aaPredicted RBP12.97□□□□□ -0.33
COL4A6-209ENST00000545689 RHOBTB1O94844 696 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 MPOP05164 745 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 VCAM1P19320 739 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 LHX1P48742 406 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 PCSK7Q16549 785 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 SLC25A41Q8N5S1 370 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 THAP11Q96EK4 314 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 TLR10Q9BXR5 811 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 PCDHGC5Q9Y5F6 944 aa12.97□□□□□ -0.33
COL4A6-209ENST00000545689 CCL15-CCL14A0A0B4J2E2 113 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 H7C4K7 107 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 PAEPP09466 180 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 GCLCP48506 637 aaPredicted RBP12.96□□□□□ -0.33
COL4A6-209ENST00000545689 KCNMA1Q12791 1236 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 EZH2Q15910 746 aaKnown RBP12.96□□□□□ -0.33
COL4A6-209ENST00000545689 CCL15Q16663 113 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 NT5DC3Q86UY8 548 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 CLEC4FQ8N1N0 589 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 NUDT12Q9BQG2 462 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 DDTLA6NHG4 134 aaPredicted RBP12.96□□□□□ -0.33
COL4A6-209ENST00000545689 SLITRK3O94933 977 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 PTPN4P29074 926 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 RRM2BQ7LG56 351 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 CHSY1Q86X52 802 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 TAGAPQ8N103 731 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 TMCO5AQ8N6Q1 288 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 CINPQ9BW66 212 aaPredicted RBP12.96□□□□□ -0.33
COL4A6-209ENST00000545689 DCLRE1BQ9H816 532 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 DDIT4Q9NX09 232 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 MOSPD1Q9UJG1 213 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 AP4E1Q9UPM8 1137 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 SIK3Q9Y2K2 1263 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 C5orf58C9J3I9 102 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 RARRES1P49788 294 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 ST8SIA6P61647 398 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 SLC15A2Q16348 729 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 FAM162AQ96A26 154 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 ADNPQ9H2P0 1102 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 CXorf56Q9H5V9 222 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 EFCAB1Q9HAE3 211 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 APPL1Q9UKG1 709 aa12.96□□□□□ -0.33
COL4A6-209ENST00000545689 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 FKBP6O75344 327 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 KIZQ2M2Z5 673 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 SPDYAQ5MJ70 313 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 CTSHP09668 335 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 NEK2P51955 445 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 ARHGEF7Q14155 803 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 TTLL9Q3SXZ7 439 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 ERO1BQ86YB8 467 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 ADGRF2Q8IZF7 708 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 DACH2Q96NX9 599 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 PIDD1Q9HB75 910 aa12.96□□□□□ -0.34
COL4A6-209ENST00000545689 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.96□□□□□ -0.34
COL4A6-209ENST00000545689 FAM32AQ9Y421 112 aaKnown RBP12.96□□□□□ -0.34
COL4A6-209ENST00000545689 AP1G2O75843 785 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 RBP1P09455 135 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 WASHC2DQ5SRD0 308 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 C6orf10Q5SRN2 563 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 SCUBE1Q8IWY4 988 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 ZNF512Q96ME7 567 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-209ENST00000545689 ZNF556Q9HAH1 456 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 SPON1Q9HCB6 807 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 NUP93Q8N1F7 819 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 STX19Q8N4C7 294 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 VPS37AQ8NEZ2 397 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 RAET1EQ8TD07 263 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 ACSF2Q96CM8 615 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-209ENST00000545689 SEPT5Q99719 369 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-209ENST00000545689 SEPT3Q9UH03 358 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 DTNAQ9Y4J8 743 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 ZMYM2Q9UBW7 1377 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 C2orf81A6NN90 581 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 NR2C2P49116 596 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 SLC11A2P49281 568 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms