RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 MED10Q9BTT4 135 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 NFU1Q9UMS0 254 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 TTC3P53804 2025 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 F8W810 466 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 TMEM189-UBE2V1I3L0A0 370 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 TRUB2O95900 331 aaKnown RBP20.81■□□□□ 0.92
COPS7A-218ENST00000543939 TYMPP19971 482 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 ZFYVE27Q5T4F4 411 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 EMBQ6PCB8 327 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 FAM35AQ86V20 835 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 C1orf54Q8WWF1 131 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 ACSF2Q96CM8 615 aaPredicted RBP20.81■□□□□ 0.92
COPS7A-218ENST00000543939 PCED1BQ96HM7 432 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 RAB17Q9H0T7 212 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 ZWILCHQ9H900 591 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 KRT82Q9NSB4 513 aa20.81■□□□□ 0.92
COPS7A-218ENST00000543939 UTP11Q9Y3A2 253 aaKnown RBP20.81■□□□□ 0.92
COPS7A-218ENST00000543939 ARHGEF37A1IGU5 675 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 C3orf70A6NLC5 250 aaPredicted RBP20.8■□□□□ 0.92
COPS7A-218ENST00000543939 FAM200BP0CF97 657 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 CDKN2BP42772 138 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 FAAP100Q0VG06 881 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 C15orf59Q2T9L4 293 aaPredicted RBP20.8■□□□□ 0.92
COPS7A-218ENST00000543939 SH3PXD2AQ5TCZ1 1133 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 FAM171BQ6P995 826 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.8■□□□□ 0.92
COPS7A-218ENST00000543939 SLCO2A1Q92959 643 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 DCLK3Q9C098 648 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 HIPK3Q9H422 1215 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 USP18Q9UMW8 372 aa20.8■□□□□ 0.92
COPS7A-218ENST00000543939 R3HDM2Q9Y2K5 976 aaKnown RBP20.8■□□□□ 0.92
COPS7A-218ENST00000543939 hCG_1818297A0A087WSY0 165 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 LRRD1A4D1F6 860 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 CXCL10P02778 98 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 SMTNL2Q2TAL5 461 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 TFDP3Q5H9I0 405 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 INTS6LQ5JSJ4 861 aaKnown RBP20.79■□□□□ 0.92
COPS7A-218ENST00000543939 DUPD1Q68J44 220 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 DDX42Q86XP3 938 aaKnown RBP eCLIP20.79■□□□□ 0.92
COPS7A-218ENST00000543939 CMASQ8NFW8 434 aaPredicted RBP20.79■□□□□ 0.92
COPS7A-218ENST00000543939 CAVIN3Q969G5 261 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 CFAP57Q96MR6 1250 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 TOX2Q96NM4 488 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 PEBP4Q96S96 227 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 PKMYT1Q99640 499 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 ERP44Q9BS26 406 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 CHST7Q9NS84 486 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 HOMER3Q9NSC5 361 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 PCSK1NQ9UHG2 260 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 RASAL2Q9UJF2 1139 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 PCDHB8Q9UN66 801 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 PCDHB7Q9Y5E2 793 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 PTPRDP23468 1912 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 NLRC5Q86WI3 1866 aa20.79■□□□□ 0.92
COPS7A-218ENST00000543939 DCDC2CA8MYV0 355 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 DAPK3O43293 454 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 KRT10P13645 584 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 ECHS1P30084 290 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 SDC4P31431 198 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 PTPN9P43378 593 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 TNNT3P45378 269 aaPredicted RBP20.78■□□□□ 0.92
COPS7A-218ENST00000543939 KCNJ1P48048 391 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 ADCY2Q08462 1091 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 ADCY1Q08828 1119 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 ADIGQ0VDE8 80 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 CCNG2Q16589 344 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 TAZQ16635 292 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 KCTD19Q17RG1 926 aaPredicted RBP20.78■□□□□ 0.92
COPS7A-218ENST00000543939 RAB6CQ53S08 254 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 ODF2Q5BJF6 829 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 KCNT1Q5JUK3 1230 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 OVOS1Q6IE37 1185 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 CYP4V2Q6ZWL3 525 aaPredicted RBP20.78■□□□□ 0.92
COPS7A-218ENST00000543939 CCDC105Q8IYK2 499 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 ATG4AQ8WYN0 398 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 SCLYQ96I15 445 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 ZNF333Q96JL9 665 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 GDAP1L1Q96MZ0 367 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 SMOQ99835 787 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 RAB6CQ9H0N0 254 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 FAM114A2Q9NRY5 505 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 OGFRQ9NZT2 677 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 RRP9O43818 475 aaKnown RBP20.78■□□□□ 0.92
COPS7A-218ENST00000543939 AP1G2O75843 785 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 TJP3O95049 919 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 PARNO95453 639 aaKnown RBP20.78■□□□□ 0.92
COPS7A-218ENST00000543939 KDELR1P24390 212 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 MAP3K7CLP57077 242 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 TLE2Q04725 743 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 RNASELQ05823 741 aaKnown RBP20.78■□□□□ 0.92
COPS7A-218ENST00000543939 NNTQ13423 1086 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 TRIM60Q495X7 471 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 EFHC1Q5JVL4 640 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 C1orf53Q5VUE5 145 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 SND1Q7KZF4 910 aaKnown RBP eCLIP20.78■□□□□ 0.92
COPS7A-218ENST00000543939 CRIPAKQ8N1N5 446 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 ZMIZ2Q8NF64 920 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 MYLPFQ96A32 169 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 CASD1Q96PB1 797 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 C11orf84Q9BUA3 381 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms