RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TDRD12Q587J7 1177 aaKnown RBP6.66□□□□□ -1.34
LTBR-212ENST00000543542 FIGNQ5HY92 759 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 GPR158Q5T848 1215 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 DPY19L2P1Q6NXN4 242 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 DENND1BQ6P3S1 775 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 SARM1Q6SZW1 724 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 PIGZQ86VD9 579 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 TTC30AQ86WT1 665 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 ZNF677Q86XU0 584 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 TMEM35BQ8NCS4 154 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 MSANTD4Q8NCY6 345 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 PDZD8Q8NEN9 1154 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 ZMIZ2Q8NF64 920 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 SCAMP5Q8TAC9 235 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 ITFG1Q8TB96 612 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 FEZF2Q8TBJ5 459 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 IPO4Q8TEX9 1081 aaKnown RBP6.66□□□□□ -1.34
LTBR-212ENST00000543542 SUSD6Q92537 303 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 GOLGA1Q92805 767 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 TCEAL4Q96EI5 215 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 EDEM3Q9BZQ6 932 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 GPR88Q9GZN0 384 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 MIS12Q9H081 205 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 NUCKS1Q9H1E3 243 aaKnown RBP6.66□□□□□ -1.34
LTBR-212ENST00000543542 CSNK1G1Q9HCP0 422 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 ZNF334Q9HCZ1 680 aaPredicted RBP6.66□□□□□ -1.34
LTBR-212ENST00000543542 PNPLA8Q9NP80 782 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 ZNHIT6Q9NWK9 470 aaKnown RBP6.66□□□□□ -1.34
LTBR-212ENST00000543542 COMMD8Q9NX08 183 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.66□□□□□ -1.34
LTBR-212ENST00000543542 CHORDC1Q9UHD1 332 aaPredicted RBP6.66□□□□□ -1.34
LTBR-212ENST00000543542 MYO6Q9UM54 1294 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 ITIH6Q6UXX5 1313 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 PATJQ8NI35 1801 aa6.66□□□□□ -1.34
LTBR-212ENST00000543542 XIRP2A4UGR9 3374 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 DENND4AQ7Z401 1863 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 TRAV19A0A0A6YYK7 116 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 A0A1W2PQJ5 194 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 TULP2O00295 520 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 CKMP06732 381 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 MMEP08473 750 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 CFHP08603 1231 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 USP17L7P0C7H9 530 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 RALAP11233 206 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 HMGA1P17096 107 aaKnown RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 AVPR1AP37288 418 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 PBX1P40424 430 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ACADSBP45954 432 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 PLA2G4AP47712 749 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 PPP3CCP48454 512 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ZNF75DP51815 510 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 USP46P62068 366 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ZBED6P86452 979 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 CDR2Q01850 454 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ADIGQ0VDE8 80 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 SLC5A9Q2M3M2 681 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 TJAP1Q5JTD0 557 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 BTBD8Q5XKL5 378 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 SMYD5Q6GMV2 418 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 RSRC2Q7L4I2 434 aaKnown RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 GPRIN1Q7Z2K8 1008 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 NOP9Q86U38 636 aaKnown RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 VPS36Q86VN1 386 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ERICH1Q86X53 443 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 TMC8Q8IU68 726 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 VSTM4Q8IW00 320 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ARHGAP18Q8N392 663 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 PLCD3Q8N3E9 789 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 MAB21L3Q8N8X9 362 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 C1orf131Q8NDD1 294 aaKnown RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 SHKBP1Q8TBC3 707 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 SLC20A1Q8WUM9 679 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ANP32BQ92688 251 aaKnown RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 FGF13Q92913 245 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 TRMT2BQ96GJ1 504 aaKnown RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 PPP1R13BQ96KQ4 1090 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 HSFY1Q96LI6 401 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 AGPAT1Q99943 283 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ZSWIM1Q9BR11 485 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.65□□□□□ -1.34
LTBR-212ENST00000543542 ULBP1Q9BZM6 244 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 UBXN6Q9BZV1 441 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 DEF6Q9H4E7 631 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 TLR8Q9NR97 1041 aaKnown RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 TMEM30AQ9NV96 361 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 GMIPQ9P107 970 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 PRKAG3Q9UGI9 489 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 NAGPAQ9UK23 515 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 CDH7Q9ULB5 785 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 CAPN11Q9UMQ6 739 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 PCDHGC3Q9UN70 934 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ZFP37Q9Y6Q3 630 aaPredicted RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 GREB1Q4ZG55 1949 aa6.65□□□□□ -1.34
LTBR-212ENST00000543542 ZNF638Q14966 1978 aaKnown RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 TCF20Q9UGU0 1960 aaKnown RBP6.65□□□□□ -1.34
LTBR-212ENST00000543542 PRUNE2Q8WUY3 3088 aa6.65□□□□□ -1.35
LTBR-212ENST00000543542 COL6A3P12111 3177 aa6.65□□□□□ -1.35
LTBR-212ENST00000543542 OBSL1O75147 1896 aa6.64□□□□□ -1.35
LTBR-212ENST00000543542 A0A1W2PQH9 124 aa6.64□□□□□ -1.35
LTBR-212ENST00000543542 TMCO5BA8MYB1 307 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms