RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 Q4G0T1 1027 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 ATXN2LQ8WWM7 1075 aaKnown RBP13.57□□□□□ -0.24
TNC-212ENST00000542877 CGRRF1Q99675 332 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 THUMPD3Q9BV44 507 aaKnown RBP13.57□□□□□ -0.24
TNC-212ENST00000542877 APOL5Q9BWW9 433 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.57□□□□□ -0.24
TNC-212ENST00000542877 TFE3P19532 575 aaPredicted RBP13.57□□□□□ -0.24
TNC-212ENST00000542877 RRM1P23921 792 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 PEX5P50542 639 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 CHRNB3Q05901 458 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 ZNF333Q96JL9 665 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 AGXT2Q9BYV1 514 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 WDCPQ9H6R7 721 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 TRPC7Q9HCX4 862 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 TRMT6Q9UJA5 497 aaKnown RBP13.57□□□□□ -0.24
TNC-212ENST00000542877 HEATR9A2RTY3 570 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 TPST1O60507 370 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 MAPRE1Q15691 268 aaKnown RBP13.56□□□□□ -0.24
TNC-212ENST00000542877 ZNF720Q7Z2F6 126 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 CHSY1Q86X52 802 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 ZNF512Q96ME7 567 aaPredicted RBP13.56□□□□□ -0.24
TNC-212ENST00000542877 BRD8Q9H0E9 1235 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 KCTD10Q9H3F6 313 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 TUBGCP4Q9UGJ1 667 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 SNX13Q9Y5W8 968 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 PDE5AO76074 875 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 ZCCHC18P0CG32 403 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 CYP2C9P11712 490 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 KRR1Q13601 381 aaKnown RBP13.56□□□□□ -0.24
TNC-212ENST00000542877 SEC23AQ15436 765 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 TTLL9Q3SXZ7 439 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 SGO1Q5FBB7 561 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 NT5DC1Q5TFE4 455 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 SAMD3Q8N6K7 520 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 NAALADL1Q9UQQ1 740 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 RIPK2O43353 540 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 PMPCBO75439 489 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 AKAP3O75969 853 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 NPTXRO95502 500 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 F9P00740 461 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 SERPIND1P05546 499 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 ZNF23P17027 643 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 CLEC16AQ2KHT3 1053 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 CCDC81Q6ZN84 652 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 TADA1Q96BN2 335 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 CBWD1Q9BRT8 395 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 CAB39Q9Y376 341 aaPredicted RBP13.56□□□□□ -0.24
TNC-212ENST00000542877 STX7O15400 261 aaKnown RBP13.56□□□□□ -0.24
TNC-212ENST00000542877 NTRK3Q16288 839 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 PPP4R4Q6NUP7 873 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.56□□□□□ -0.24
TNC-212ENST00000542877 ATP6V0D2Q8N8Y2 350 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 DIS3LQ8TF46 1054 aaKnown RBP13.56□□□□□ -0.24
TNC-212ENST00000542877 PCDH9Q9HC56 1237 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 DDIT4Q9NX09 232 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 SHOC2Q9UQ13 582 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 LAMC2Q13753 1193 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 KCNT1Q5JUK3 1230 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 ADCK2Q7Z695 626 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 FAM9CQ8IZT9 166 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 CNPY3Q9BT09 278 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 SEMA4AQ9H3S1 761 aa13.56□□□□□ -0.24
TNC-212ENST00000542877 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 CLPTM1O96005 669 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 ETFBP38117 255 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 NPTX2P47972 431 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 SARSP49591 514 aaKnown RBP13.55□□□□□ -0.24
TNC-212ENST00000542877 IYDQ6PHW0 289 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 TMEM121Q9BTD3 319 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 IMPAD1Q9NX62 359 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 WWOXQ9NZC7 414 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 DRG1Q9Y295 367 aaKnown RBP13.55□□□□□ -0.24
TNC-212ENST00000542877 AFF2P51816 1311 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 RBP1P09455 135 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 CPA3P15088 417 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 TCF7P36402 384 aaPredicted RBP13.55□□□□□ -0.24
TNC-212ENST00000542877 HARS2P49590 506 aaKnown RBP13.55□□□□□ -0.24
TNC-212ENST00000542877 IZUMO2Q6UXV1 221 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 MTMR8Q96EF0 704 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 BGNP21810 368 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 TBX2Q13207 712 aaPredicted RBP13.55□□□□□ -0.24
TNC-212ENST00000542877 TIGD7Q6NT04 549 aaPredicted RBP13.55□□□□□ -0.24
TNC-212ENST00000542877 TTC30AQ86WT1 665 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 TMPRSS6Q8IU80 811 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 FAM153AQ9UHL3 310 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 RNF112Q9ULX5 631 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 KRT87PA6NCN2 255 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 C2orf81A6NN90 581 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 FCGR1AP12314 374 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 TMEM62Q0P6H9 643 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 PDPK2PQ6A1A2 396 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 USP13Q92995 863 aaPredicted RBP13.55□□□□□ -0.24
TNC-212ENST00000542877 SEPT5Q99719 369 aaPredicted RBP13.55□□□□□ -0.24
TNC-212ENST00000542877 CINPQ9BW66 212 aaPredicted RBP13.55□□□□□ -0.24
TNC-212ENST00000542877 SPATA16Q9BXB7 569 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 USP18Q9UMW8 372 aa13.55□□□□□ -0.24
TNC-212ENST00000542877 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms